RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 RAB33AQ14088 237 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 KCNB1Q14721 858 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 SNRNP35Q16560 246 aaKnown RBP13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 CTXN3Q4LDR2 81 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 ATAT1Q5SQI0 421 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 LIN9Q5TKA1 542 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 LMBRD2Q68DH5 695 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 ZNF280DQ6N043 979 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 LILRA6Q6PI73 481 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 RSPO2Q6UXX9 243 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 C12orf56Q8IXR9 622 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 HDAC7Q8WUI4 952 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 ANKRD36BP1Q96IX9 119 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 FAM84AQ96KN4 292 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 RPGRIP1Q96KN7 1286 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 SENP8Q96LD8 212 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 NECTIN4Q96NY8 510 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 PHF7Q9BWX1 381 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 MTMR12Q9C0I1 747 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 CD320Q9NPF0 282 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 MAPK8IP1Q9UQF2 711 aa13.62□□□□□ -0.23
SMARCE1-218ENST00000582955 C5orf42Q9H799 3197 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 CCDC195A0A1B0GUA6 201 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 SPTLC1O15269 473 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 SMC2O95347 1197 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 TNNC2P02585 160 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 KRT19P08727 400 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 DLATP10515 647 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 SP100P23497 879 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 PAX3P23760 479 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 POLR2BP30876 1174 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 ROR1Q01973 937 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 MRPL58Q14197 206 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 SV2CQ496J9 727 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 GPR149Q86SP6 731 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 CSGALNACT2Q8N6G5 542 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 C1orf127Q8N9H9 656 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 FEZF2Q8TBJ5 459 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 ZNF560Q96MR9 790 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 TIGD1Q96MW7 591 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 FNBP1Q96RU3 617 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 KCTD10Q9H3F6 313 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 POMKQ9H5K3 350 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 PIDD1Q9HB75 910 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 RMND1Q9NWS8 449 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 FBXL5Q9UKA1 691 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 FBXW11Q9UKB1 542 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 AGAP1Q9UPQ3 857 aa13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
SMARCE1-218ENST00000582955 CUL9Q8IWT3 2517 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 ARHGEF37A1IGU5 675 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 PDXKO00764 312 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 CYB561D2O14569 222 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 CALUO43852 315 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 ZMYND10O75800 440 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 C8AP07357 584 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 CPB1P15086 417 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 TNNI1P19237 187 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 PNPLA4P41247 253 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 CYP24A1Q07973 514 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 BFSP1Q12934 665 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 DUOXA2Q1HG44 320 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 PPM1LQ5SGD2 360 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 OVOS1Q6IE37 1185 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 SLC8B1Q6J4K2 584 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 C15orf39Q6ZRI6 1047 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 WDR49Q8IV35 697 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 SMYD4Q8IYR2 804 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 CMASQ8NFW8 434 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 OR5B17Q8NGF7 314 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 SMG7Q92540 1137 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 ERCC4Q92889 916 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 SMARCE1Q969G3 411 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 CCDC127Q96BQ5 260 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 INTS13Q9NVM9 706 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 ZDHHC7Q9NXF8 308 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 ITGA11Q9UKX5 1188 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 PTPRJQ12913 1337 aa13.6□□□□□ -0.23
SMARCE1-218ENST00000582955 WDR27A2RRH5 827 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 KPNA7A9QM74 516 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 TBC1D4O60343 1298 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 NR3C1P04150 777 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 TYMPP19971 482 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 ELF1P32519 619 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 RBP5P82980 135 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 PSMD6Q15008 389 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 CEP135Q66GS9 1140 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 CCDC149Q6ZUS6 474 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 METTL23Q86XA0 190 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 GUF1Q8N442 669 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 SLC7A14Q8TBB6 771 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 GSDMAQ96QA5 445 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 CGRRF1Q99675 332 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 MUC3AQ02505 3323 aa13.59□□□□□ -0.23
SMARCE1-218ENST00000582955 MTCL1Q9Y4B5 1905 aaKnown RBP13.58□□□□□ -0.23
SMARCE1-218ENST00000582955 SCN1AP35498 2009 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms