RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 NUP62CLQ9H1M0 184 aa11.25□□□□□ -0.61
TOP3A-212ENST00000582122 CXCL16Q9H2A7 254 aa11.25□□□□□ -0.61
TOP3A-212ENST00000582122 IKZF4Q9H2S9 585 aa11.25□□□□□ -0.61
TOP3A-212ENST00000582122 CLSTN2Q9H4D0 955 aa11.25□□□□□ -0.61
TOP3A-212ENST00000582122 PDE11AQ9HCR9 933 aa11.25□□□□□ -0.61
TOP3A-212ENST00000582122 LMBRD1Q9NUN5 540 aa11.25□□□□□ -0.61
TOP3A-212ENST00000582122 DACH1Q9UI36 760 aa11.25□□□□□ -0.61
TOP3A-212ENST00000582122 CD207Q9UJ71 328 aa11.25□□□□□ -0.61
TOP3A-212ENST00000582122 MAN1B1Q9UKM7 699 aa11.25□□□□□ -0.61
TOP3A-212ENST00000582122 SPDYE4A6NLX3 237 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 C2CD2LO14523 706 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 PER2O15055 1255 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 SLC16A3O15427 465 aaKnown RBP11.24□□□□□ -0.61
TOP3A-212ENST00000582122 TEX28O15482 410 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 OAZ2O95190 189 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 CSPG5O95196 566 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 CYP11A1P05108 521 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 FAM163BP0C2L3 166 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 DLATP10515 647 aaKnown RBP11.24□□□□□ -0.61
TOP3A-212ENST00000582122 EPB41P11171 864 aaKnown RBP11.24□□□□□ -0.61
TOP3A-212ENST00000582122 PRKCSHP14314 528 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-212ENST00000582122 KCNA5P22460 613 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 CCNE1P24864 410 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 ATICP31939 592 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 GTF2H1P32780 548 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 CLCN4P51793 760 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 CLDN10P78369 228 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 YWHAHQ04917 246 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-212ENST00000582122 SPAG1Q07617 926 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 SMAD4Q13485 552 aaKnown RBP11.24□□□□□ -0.61
TOP3A-212ENST00000582122 KCNC3Q14003 757 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 ZCWPW2Q504Y3 356 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 RTP2Q5QGT7 225 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 CEP135Q66GS9 1140 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 SLC8B1Q6J4K2 584 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 CES5AQ6NT32 575 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 DPH6Q7L8W6 267 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 TAS1R1Q7RTX1 841 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 EFCAB13Q8IY85 973 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 CSGALNACT2Q8N6G5 542 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 MLKLQ8NB16 471 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 RDH13Q8NBN7 331 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 C3orf58Q8NDZ4 430 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 LNX1Q8TBB1 728 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-212ENST00000582122 PARD3BQ8TEW8 1205 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 RABGGTAQ92696 567 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 CEP63Q96MT8 703 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 METTL14Q9HCE5 456 aaKnown RBP11.24□□□□□ -0.61
TOP3A-212ENST00000582122 MTRRQ9UBK8 725 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 MAPK8IP1Q9UQF2 711 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 HCFC2Q9Y5Z7 792 aa11.24□□□□□ -0.61
TOP3A-212ENST00000582122 OR6C75A6NL08 312 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 KPNA7A9QM74 516 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 F8W810 466 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-212ENST00000582122 HUS1O60921 280 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 PHACTR2O75167 634 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 GNA14O95837 355 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 ITGB3P05106 788 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 KRT19P08727 400 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 TKTP29401 623 aaKnown RBP11.23□□□□□ -0.61
TOP3A-212ENST00000582122 POLR2BP30876 1174 aaKnown RBP11.23□□□□□ -0.61
TOP3A-212ENST00000582122 BRCC3P46736 316 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 SMARCB1Q12824 385 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 TRPC3Q13507 836 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 RAB33AQ14088 237 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 MRPL58Q14197 206 aaKnown RBP11.23□□□□□ -0.61
TOP3A-212ENST00000582122 UVSSAQ2YD98 709 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 CTXN3Q4LDR2 81 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 VARS2Q5ST30 1063 aaKnown RBP11.23□□□□□ -0.61
TOP3A-212ENST00000582122 TPGS2Q68CL5 300 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 ANKRD54Q6NXT1 300 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 CD300LGQ6UXG3 332 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 CCDC149Q6ZUS6 474 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 FAM186BQ8IYM0 893 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 THEM5Q8N1Q8 247 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 TMEM86AQ8N2M4 240 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 C1orf127Q8N9H9 656 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 CMASQ8NFW8 434 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-212ENST00000582122 SLC22A17Q8WUG5 538 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 AUTS2Q8WXX7 1259 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 TAF4BQ92750 862 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 SYAP1Q96A49 352 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-212ENST00000582122 CCDC127Q96BQ5 260 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 SENP8Q96LD8 212 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 RIPOR3Q96MK2 946 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 NECTIN4Q96NY8 510 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 MTMR12Q9C0I1 747 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 DNAI2Q9GZS0 605 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 SFXN1Q9H9B4 322 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 ZDHHC7Q9NXF8 308 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 GDAP2Q9NXN4 497 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 CACNG4Q9UBN1 327 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 AGAP1Q9UPQ3 857 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 PCDHGC5Q9Y5F6 944 aa11.23□□□□□ -0.61
TOP3A-212ENST00000582122 CYB561D2O14569 222 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 STAU1O95793 577 aaKnown RBP11.22□□□□□ -0.61
TOP3A-212ENST00000582122 HNRNPA1P09651 372 aaKnown RBP eCLIP11.22□□□□□ -0.61
TOP3A-212ENST00000582122 P4HA1P13674 534 aa11.22□□□□□ -0.61
TOP3A-212ENST00000582122 HOXA9P31269 272 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms