RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 ZXDAP98168 799 aa13.42□□□□□ -0.26
SMARCD2-209ENST00000581832 CCDC149Q6ZUS6 474 aa13.42□□□□□ -0.26
SMARCD2-209ENST00000581832 RTL10Q7L3V2 364 aa13.42□□□□□ -0.26
SMARCD2-209ENST00000581832 APPL2Q8NEU8 664 aa13.42□□□□□ -0.26
SMARCD2-209ENST00000581832 SMG7Q92540 1137 aaKnown RBP13.42□□□□□ -0.26
SMARCD2-209ENST00000581832 SLC39A2Q9NP94 309 aa13.42□□□□□ -0.26
SMARCD2-209ENST00000581832 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
SMARCD2-209ENST00000581832 DPP3Q9NY33 737 aa13.42□□□□□ -0.26
SMARCD2-209ENST00000581832 USP25Q9UHP3 1055 aa13.42□□□□□ -0.26
SMARCD2-209ENST00000581832 TIMM13Q9Y5L4 95 aaPredicted RBP13.42□□□□□ -0.26
SMARCD2-209ENST00000581832 CLUHO75153 1309 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 ARHGEF37A1IGU5 675 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 H7C4K7 107 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 KIAA0391O15091 583 aaKnown RBP13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 SEC24AO95486 1093 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 CYP11A1P05108 521 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 TYMPP19971 482 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 STK4Q13043 487 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 PTPN21Q16825 1174 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 KMT5BQ4FZB7 885 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 TMEM31Q5JXX7 168 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 ARMCX5Q6P1M9 558 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 ELMSAN1Q6PJG2 1045 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 STXBP4Q6ZWJ1 553 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 GPD1LQ8N335 351 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 PLCD3Q8N3E9 789 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 C1orf127Q8N9H9 656 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 KIAA0895Q8NCT3 520 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 SLC7A14Q8TBB6 771 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 FAM84AQ96KN4 292 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 SENP8Q96LD8 212 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 PDE11AQ9HCR9 933 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 AGPAT3Q9NRZ7 376 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 RBAKQ9NYW8 714 aaPredicted RBP13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 LIMD1Q9UGP4 676 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 MUC6Q6W4X9 2439 aa13.41□□□□□ -0.26
SMARCD2-209ENST00000581832 UBE4BO95155 1302 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 PRR33A8MZF0 331 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 MYL1P05976 194 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 PRR29P0C7W0 189 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 PAX3P23760 479 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 SYKP43405 635 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 SNRPFP62306 86 aaKnown RBP13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 NUCB2P80303 420 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 YWHAHQ04917 246 aaPredicted RBP13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 CTXN3Q4LDR2 81 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 PPM1LQ5SGD2 360 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 TPGS2Q68CL5 300 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 ZNF280DQ6N043 979 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 POTEHQ6S545 545 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 OTOP3Q7RTS5 596 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 TCEAL8Q8IYN2 117 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 TDRD5Q8NAT2 981 aaKnown RBP13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 TMEM174Q8WUU8 243 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 ASIC4Q96FT7 647 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 MYADMQ96S97 322 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 RTP3Q9BQQ7 232 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 GZF1Q9H116 711 aaPredicted RBP13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 HSPBP1Q9NZL4 362 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 EPS15L1Q9UBC2 864 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 SIX4Q9UIU6 781 aa13.4□□□□□ -0.26
SMARCD2-209ENST00000581832 PTPRJQ12913 1337 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 CCL16O15467 120 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 ZNF202O95125 648 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 ASGR2P07307 311 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 NTHL1P78549 312 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 DPYDQ12882 1025 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 PSMD2Q13200 908 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 KNOP1Q1ED39 458 aaKnown RBP13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 LIN9Q5TKA1 542 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 RNF19BQ6ZMZ0 732 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 KRBA2Q6ZNG9 492 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 TRIM67Q6ZTA4 783 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 GRASPQ7Z6J2 395 aaPredicted RBP13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 NELFCDQ8IXH7 590 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 C12orf56Q8IXR9 622 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 FSIP1Q8NA03 581 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 TMEM209Q96SK2 561 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 OXCT2Q9BYC2 517 aaPredicted RBP13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 KCTD10Q9H3F6 313 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 SMOC2Q9H3U7 446 aa13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 DNMT3BQ9UBC3 853 aaKnown RBP13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 AFF4Q9UHB7 1163 aaKnown RBP13.39□□□□□ -0.27
SMARCD2-209ENST00000581832 ZNF233A6NK53 670 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 CLIC2O15247 247 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 OR4Q2P0C623 313 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 LAMP2P13473 410 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 TAF6P49848 677 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 TFAMQ00059 246 aaKnown RBP13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 ADCY1Q08828 1119 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 GPR17Q13304 367 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 OVOS1Q6IE37 1185 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 HFE2Q6ZVN8 426 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 BMP8AQ7Z5Y6 402 aa13.38□□□□□ -0.27
SMARCD2-209ENST00000581832 ENGASEQ8NFI3 743 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms