RNA–Protein interactions for RNA: ENST00000581698.1

ATPAF2-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-211ENST00000581698 CEP57L1Q8IYX8 460 aa16.28■□□□□ 0.2
ATPAF2-211ENST00000581698 SYCP3Q8IZU3 236 aa16.28■□□□□ 0.2
ATPAF2-211ENST00000581698 GPD1LQ8N335 351 aa16.28■□□□□ 0.2
ATPAF2-211ENST00000581698 BEST2Q8NFU1 509 aa16.28■□□□□ 0.2
ATPAF2-211ENST00000581698 OR10T2Q8NGX3 314 aa16.28■□□□□ 0.2
ATPAF2-211ENST00000581698 TSPAN18Q96SJ8 248 aa16.28■□□□□ 0.2
ATPAF2-211ENST00000581698 DMAC2Q9NW81 257 aa16.28■□□□□ 0.2
ATPAF2-211ENST00000581698 DPP3Q9NY33 737 aa16.28■□□□□ 0.2
ATPAF2-211ENST00000581698 FAM50BQ9Y247 325 aa16.28■□□□□ 0.2
ATPAF2-211ENST00000581698 ATP6V1DQ9Y5K8 247 aa16.28■□□□□ 0.2
ATPAF2-211ENST00000581698 RHOBTB3O94955 611 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 IL18RAPO95256 599 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 MTHFRP42898 656 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 CREMQ03060 361 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 CCDC142Q17RM4 750 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 ZNF516Q92618 1163 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 ERCC4Q92889 916 aaPredicted RBP16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 SENP8Q96LD8 212 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 MYADMQ96S97 322 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 PYM1Q9BRP8 204 aaKnown RBP16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 PRKD2Q9BZL6 878 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 MTMR12Q9C0I1 747 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 PLEKHA4Q9H4M7 779 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 HCFC1R1Q9NWW0 138 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 ZDHHC7Q9NXF8 308 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 NUB1Q9Y5A7 615 aa16.27■□□□□ 0.2
ATPAF2-211ENST00000581698 FAM86C2PA6NEL3 165 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 TRAPPC3O43617 180 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 CYP11A1P05108 521 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 C8AP07357 584 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 PNOCQ13519 176 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 KNOP1Q1ED39 458 aaKnown RBP16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 ZCWPW2Q504Y3 356 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 C1orf220Q5T0J3 134 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 RNF19BQ6ZMZ0 732 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 LIMS2Q7Z4I7 341 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 TTC9BQ8N6N2 239 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 SPATA20Q8TB22 786 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 SLC7A14Q8TBB6 771 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 TMEM174Q8WUU8 243 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 POP1Q99575 1024 aaKnown RBP16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 WDR6Q9NNW5 1121 aaKnown RBP16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 NME7Q9Y5B8 376 aa16.26■□□□□ 0.19
ATPAF2-211ENST00000581698 CLUHO75153 1309 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 HCRTO43612 131 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 ITGB3P05106 788 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 TYMPP19971 482 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 POLR2BP30876 1174 aaKnown RBP16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 CASP4P49662 377 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 CYP2J2P51589 502 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 CDR1P51861 262 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 CYP24A1Q07973 514 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 SNRNP35Q16560 246 aaKnown RBP16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 CTXN3Q4LDR2 81 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 CES5AQ6NT32 575 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 PDXDC1Q6P996 788 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 OSTM1Q86WC4 334 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 SMYD4Q8IYR2 804 aaPredicted RBP16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 SMG7Q92540 1137 aaKnown RBP16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 NECTIN4Q96NY8 510 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 EXOC1Q9NV70 894 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 INTS13Q9NVM9 706 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 CIZ1Q9ULV3 898 aaPredicted RBP16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 ZNF318Q5VUA4 2279 aa16.25■□□□□ 0.19
ATPAF2-211ENST00000581698 ARHGEF37A1IGU5 675 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 CCL16O15467 120 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 LDHAP00338 332 aaKnown RBP16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 MYL1P05976 194 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 ASGR2P07307 311 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 POU2F2P09086 479 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 ATF2P15336 505 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 HOXA9P31269 272 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 TFAMQ00059 246 aaKnown RBP16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 SLC5A9Q2M3M2 681 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 ATAT1Q5SQI0 421 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 WSCD1Q658N2 575 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 LRRTM3Q86VH5 581 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 NT5DC4Q86YG4 428 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 TCEAL8Q8IYN2 117 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 TMEM87AQ8NBN3 555 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 ZNF461Q8TAF7 563 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 MFSD14AQ96MC6 490 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 RIPOR3Q96MK2 946 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 DNMT3BQ9UBC3 853 aaKnown RBP16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 L1RE1Q9UN81 338 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 COL4A3Q01955 1670 aa16.24■□□□□ 0.19
ATPAF2-211ENST00000581698 KIAA0391O15091 583 aaKnown RBP16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 XPOTO43592 962 aaKnown RBP16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 DCXO43602 365 aa16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 DLG4P78352 724 aa16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 YWHAHQ04917 246 aaPredicted RBP16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 FAM160A1Q05DH4 1040 aa16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 PSMD2Q13200 908 aa16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 KCNB1Q14721 858 aa16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 PSMD6Q15008 389 aa16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 ZNF280DQ6N043 979 aa16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 STXBP4Q6ZWJ1 553 aa16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 GRASPQ7Z6J2 395 aaPredicted RBP16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 SLC9A9Q8IVB4 645 aa16.23■□□□□ 0.19
ATPAF2-211ENST00000581698 ZDHHC14Q8IZN3 488 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms