RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 STXBP5Q5T5C0 1151 aa13.82□□□□□ -0.2
CSNK1D-218ENST00000581655 GALNT17Q6IS24 598 aa13.82□□□□□ -0.2
CSNK1D-218ENST00000581655 KIAA1211LQ6NV74 962 aa13.82□□□□□ -0.2
CSNK1D-218ENST00000581655 HAUS6Q7Z4H7 955 aa13.82□□□□□ -0.2
CSNK1D-218ENST00000581655 PIGOQ8TEQ8 1089 aa13.82□□□□□ -0.2
CSNK1D-218ENST00000581655 JAKMIP1Q96N16 626 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-218ENST00000581655 AFF4Q9UHB7 1163 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-218ENST00000581655 FREM2Q5SZK8 3169 aa13.82□□□□□ -0.2
CSNK1D-218ENST00000581655 NUP210Q8TEM1 1887 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 BCLAF3A2AJT9 711 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 ACKR2O00590 384 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 PODXLO00592 558 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 DPYSL4O14531 572 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 DEXIO95424 95 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 CSRP1P21291 193 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 PDIA3P30101 505 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 ELF2Q15723 593 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 MAPK6Q16659 721 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 DCAF4L1Q3SXM0 396 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 BLOC1S2Q6QNY1 142 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 TMC8Q8IU68 726 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 TMEM209Q96SK2 561 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 HSD17B14Q9BPX1 270 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 LRRC3Q9BY71 257 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 AGXT2Q9BYV1 514 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 C2orf40Q9H1Z8 148 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 POLR3BQ9NW08 1133 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 KCNJ14Q9UNX9 436 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 YIPF1Q9Y548 306 aa13.81□□□□□ -0.2
CSNK1D-218ENST00000581655 ADAMTS20P59510 1910 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 SMIM28A0A1B0GU29 152 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 DCLK1O15075 740 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 HYAL3O43820 417 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 ATG13O75143 517 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 BAG4O95429 457 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 CPB1P15086 417 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 ZNF280DQ6N043 979 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 RNF19BQ6ZMZ0 732 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 SLFN12Q8IYM2 578 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 BSNDQ8WZ55 320 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 HHIPQ96QV1 700 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 MKNK1Q9BUB5 465 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 CCDC113Q9H0I3 377 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 TMEM9BQ9NQ34 198 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 NEUROG3Q9Y4Z2 214 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 NUB1Q9Y5A7 615 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 IGSF10Q6WRI0 2623 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 THADAQ6YHU6 1953 aa13.8□□□□□ -0.2
CSNK1D-218ENST00000581655 CDX4O14627 284 aaPredicted RBP13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 RHOBTB1O94844 696 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 ITPRIPL2Q3MIP1 535 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 FSTL4Q6MZW2 842 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 PIK3AP1Q6ZUJ8 805 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 FBXL16Q8N461 479 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 CAMKK1Q8N5S9 505 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 CEP120Q8N960 986 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 MCPH1Q8NEM0 835 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 DEFB124Q8NES8 71 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 DNAJC25Q9H1X3 360 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 MAFFQ9ULX9 164 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 GON4LQ3T8J9 2241 aa13.79□□□□□ -0.2
CSNK1D-218ENST00000581655 SMG1Q96Q15 3661 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 KHNYNO15037 678 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 RNF40O75150 1001 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 PRAMEF12O95522 483 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 ATP2B1P20020 1258 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 RPS6KB1P23443 525 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 GBP1P32455 592 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 PLCB2Q00722 1185 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 GRSF1Q12849 480 aaKnown RBP eCLIP13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 KARSQ15046 597 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 UAP1L1Q3KQV9 507 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 SOWAHCQ53LP3 525 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 TMEM196Q5HYL7 178 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 GPR158Q5T848 1215 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 FAM177A1Q8N128 213 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 DEPTORQ8TB45 409 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 SUSD3Q96L08 255 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 NAP1L4Q99733 375 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 ATXN3LQ9H3M9 355 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 OBP2AQ9NY56 170 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 KLK13Q9UKR3 277 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 PCDHA12Q9UN75 941 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 HELZ2Q9BYK8 2649 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 CITO14578 2027 aa13.78□□□□□ -0.2
CSNK1D-218ENST00000581655 LAMA5O15230 3695 aa13.77□□□□□ -0.2
CSNK1D-218ENST00000581655 PATE3B3GLJ2 98 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 CPLX1O14810 134 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 ZIC2O95409 532 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 MCM4P33991 863 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 NAMPTP43490 491 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 YARSP54577 528 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 EVCP57679 992 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 OSTNP61366 133 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 PLD1Q13393 1074 aa13.77□□□□□ -0.21
CSNK1D-218ENST00000581655 PTPAQ15257 358 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms