RNA–Protein interactions for RNA: ENST00000581583.1

RTTN-207, Transcript of rotatin, humanhuman

TSL 2

Gene RTTN, Length 2,355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-207ENST00000581583 EIF3HO15372 352 aaKnown RBP eCLIP12.83□□□□□ -0.36
RTTN-207ENST00000581583 ECEL1O95672 775 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 HOXC6P09630 235 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 NR1D1P20393 614 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 RPL21P46778 160 aaKnown RBP12.83□□□□□ -0.36
RTTN-207ENST00000581583 CCNA1P78396 465 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 SYDE1Q6ZW31 735 aaPredicted RBP12.83□□□□□ -0.36
RTTN-207ENST00000581583 RHOT1Q8IXI2 618 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 ARFGAP2Q8N6H7 521 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 GPRC5AQ8NFJ5 357 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 FBXO25Q8TCJ0 367 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 COPS5Q92905 334 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 FAM212AQ96EL1 285 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 SLC10A4Q96EP9 437 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 NLRP4Q96MN2 994 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 INO80BQ9C086 356 aaPredicted RBP12.83□□□□□ -0.36
RTTN-207ENST00000581583 PABPC3Q9H361 631 aaKnown RBP12.83□□□□□ -0.36
RTTN-207ENST00000581583 PDGFCQ9NRA1 345 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 CISHQ9NSE2 258 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 MTRF1LQ9UGC7 380 aaKnown RBP12.83□□□□□ -0.36
RTTN-207ENST00000581583 TNFSF13BQ9Y275 285 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 ATP8A1Q9Y2Q0 1164 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 NUDT17P0C025 328 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 GNGT1P63211 74 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 MBTD1Q05BQ5 628 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 FAM187BQ17R55 369 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 ZNF568Q3ZCX4 644 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 C2CD6Q53TS8 623 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 SGO2Q562F6 1265 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 AGBL2Q5U5Z8 902 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 ARMCX2Q7L311 632 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 PASD1Q8IV76 773 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 FEZF2Q8TBJ5 459 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 TRAPPC12Q8WVT3 735 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 SYT17Q9BSW7 474 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 RNPEPQ9H4A4 650 aa12.83□□□□□ -0.36
RTTN-207ENST00000581583 MAGEB2O15479 319 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 IL18RAPO95256 599 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 C22orf31O95567 290 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 TNNC2P02585 160 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 CALB1P05937 261 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 TMEM191BP0C7N4 346 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 YBX3P16989 372 aaKnown RBP eCLIP12.82□□□□□ -0.36
RTTN-207ENST00000581583 GJA5P36382 358 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 PMS2P54278 862 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 YWHAEP62258 255 aaKnown RBP12.82□□□□□ -0.36
RTTN-207ENST00000581583 TFAMQ00059 246 aaKnown RBP12.82□□□□□ -0.36
RTTN-207ENST00000581583 ARHGAP1Q07960 439 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 ZNF792Q3KQV3 632 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 DNAJC21Q5F1R6 531 aaKnown RBP12.82□□□□□ -0.36
RTTN-207ENST00000581583 MMS22LQ6ZRQ5 1243 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 KATNAL2Q8IYT4 538 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 XYLT2Q9H1B5 865 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 EFCC1Q9HA90 598 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 PRMT7Q9NVM4 692 aaPredicted RBP12.82□□□□□ -0.36
RTTN-207ENST00000581583 IP6K2Q9UHH9 426 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 GRIN2DO15399 1336 aa12.82□□□□□ -0.36
RTTN-207ENST00000581583 ZNFX1Q9P2E3 1918 aaKnown RBP12.81□□□□□ -0.36
RTTN-207ENST00000581583 TLR3O15455 904 aaKnown RBP12.81□□□□□ -0.36
RTTN-207ENST00000581583 STRNO43815 780 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 EIF4BP23588 611 aaKnown RBP12.81□□□□□ -0.36
RTTN-207ENST00000581583 CDH5P33151 784 aaPredicted RBP12.81□□□□□ -0.36
RTTN-207ENST00000581583 CLCN3P51790 818 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 SLMAPQ14BN4 828 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 TMEM63BQ5T3F8 832 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 SCARA3Q6AZY7 606 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 IFNLR1Q8IU57 520 aaPredicted RBP12.81□□□□□ -0.36
RTTN-207ENST00000581583 THNSL1Q8IYQ7 743 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 TMEM35BQ8NCS4 154 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 OR2W6PQ8NHA6 318 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 GRK7Q8WTQ7 553 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 ART4Q93070 314 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 EMID1Q96A84 441 aaPredicted RBP12.81□□□□□ -0.36
RTTN-207ENST00000581583 IFT122Q9HBG6 1241 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 VTA1Q9NP79 307 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 PCDHGC3Q9UN70 934 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 SLC45A1Q9Y2W3 748 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 RBM47A0AV96 593 aaKnown RBP12.81□□□□□ -0.36
RTTN-207ENST00000581583 ZEB2O60315 1214 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 GJB1P08034 283 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 CYP2C8P10632 490 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 PHKA2P46019 1235 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 KCTD19Q17RG1 926 aaPredicted RBP12.81□□□□□ -0.36
RTTN-207ENST00000581583 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 ZNF699Q32M78 642 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 TAPT1Q6NXT6 567 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 LLGL2Q6P1M3 1020 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 PHLDB2Q86SQ0 1253 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 EXD1Q8NHP7 514 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 PPTC7Q8NI37 304 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 CDT1Q9H211 546 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 RPF1Q9H9Y2 349 aaKnown RBP12.81□□□□□ -0.36
RTTN-207ENST00000581583 PTPN22Q9Y2R2 807 aa12.81□□□□□ -0.36
RTTN-207ENST00000581583 TMEM191CA6NGB0 347 aa12.8□□□□□ -0.36
RTTN-207ENST00000581583 B4GALT5O43286 388 aa12.8□□□□□ -0.36
RTTN-207ENST00000581583 GH1P01241 217 aa12.8□□□□□ -0.36
RTTN-207ENST00000581583 INSRRP14616 1297 aa12.8□□□□□ -0.36
RTTN-207ENST00000581583 ASPAP45381 313 aa12.8□□□□□ -0.36
RTTN-207ENST00000581583 KCNJ1P48048 391 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms