RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 RFX1P22670 979 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TBXAS1P24557 533 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SLC11A1P49279 550 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ALDH7A1P49419 539 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 AARSP49588 968 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MFAP3P55082 362 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 BCAR1P56945 870 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 NOP14P78316 857 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 APBA1Q02410 837 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GCNT1Q02742 428 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MLLT1Q03111 559 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TRIM14Q14142 442 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 IQCEQ6IPM2 695 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 DPH6Q7L8W6 267 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TMC6Q7Z403 805 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 LIMS2Q7Z4I7 341 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PPFIBP1Q86W92 1011 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ARHGEF19Q8IW93 802 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 DRC7Q8IY82 874 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FIBCD1Q8N539 461 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 RABGGTAQ92696 567 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ELMO3Q96BJ8 720 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 STK33Q9BYT3 514 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TTYH3Q9C0H2 523 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FAM124BQ9H5Z6 455 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CYP3A43Q9HB55 503 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.83□□□□□ -0.842e-6■■■■□ 21
CDK5RAP3-220ENST00000581160 FAM207AQ9NSI2 230 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CEP72Q9P209 647 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 IMPACTQ9P2X3 320 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CACNG4Q9UBN1 327 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 NXF1Q9UBU9 619 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CAPN11Q9UMQ6 739 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MRPL42Q9Y6G3 142 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PTPRSQ13332 1948 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 COL4A6Q14031 1691 aa9.83□□□□□ -0.84
CDK5RAP3-220ENST00000581160 RNF225M0QZC1 329 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 M0QZQ0 153 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CYB561D2O14569 222 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 EPHB6O15197 1021 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TRAPPC3O43617 180 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 LAG3P18627 525 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TRIM21P19474 475 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 IGFBP6P24592 240 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 POLR2FP61218 127 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TNNC1P63316 161 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CUL2Q13617 745 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TIGD5Q53EQ6 642 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SPOUT1Q5T280 376 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GJB7Q6PEY0 223 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 KCNT2Q6UVM3 1135 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 DSTYKQ6XUX3 929 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 RRAGAQ7L523 313 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PPM1KQ8N3J5 372 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TTC39CQ8N584 583 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TOP6BLQ8N6T0 577 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 COLGALT1Q8NBJ5 622 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 C3orf58Q8NDZ4 430 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CPLX3Q8WVH0 158 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CLP1Q92989 425 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SENP8Q96LD8 212 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 KREMEN1Q96MU8 473 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ZNF558Q96NG5 402 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 BCO2Q9BYV7 579 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 NIF3L1Q9GZT8 377 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 AAASQ9NRG9 546 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MARCH5Q9NX47 278 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 HCSTQ9UBK5 93 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 MYO6Q9UM54 1294 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 POLIQ9UNA4 740 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 PCDHA11Q9Y5I1 949 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SNX9Q9Y5X1 595 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SCN1AP35498 2009 aa9.82□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ARHGEF37A1IGU5 675 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GRXCR1A8MXD5 290 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 NT5C1B-RDH14C9J2C7 533 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 FOXN3O00409 490 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 HUS1O60921 280 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TACC1O75410 805 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CLSTN1O94985 981 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 KIF4AO95239 1232 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 EFEMP2O95967 443 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 GYPCP04921 128 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 TPM1P09493 284 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 LINC00271P0C7V0 271 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ACO1P21399 889 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CASP14P31944 242 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 STAT1P42224 750 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ASPAP45381 313 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 BRCC3P46736 316 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 RABGGTBP53611 331 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 JAM2P57087 298 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 YWHAEP62258 255 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ZBED6P86452 979 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ELAVL2Q12926 359 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 DRAP1Q14919 205 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 ARHGAP44Q17R89 818 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SOWAHAQ2M3V2 549 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 CACNA2D4Q7Z3S7 1137 aa9.81□□□□□ -0.84
CDK5RAP3-220ENST00000581160 SLC39A11Q8N1S5 342 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms