RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 USP41Q3LFD5 358 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 ATAT1Q5SQI0 421 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 SPATA1Q5VX52 437 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 USP37Q86T82 979 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 GPR65Q8IYL9 337 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 MFSD14AQ96MC6 490 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 RIPOR3Q96MK2 946 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 NECTIN4Q96NY8 510 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 PAAF1Q9BRP4 392 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 TMEM63CQ9P1W3 806 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 CACNG4Q9UBN1 327 aa10.7□□□□□ -0.7
GGA3-209ENST00000580646 SPDYE4A6NLX3 237 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 BIN1O00499 593 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 CETN3O15182 167 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 SLC16A3O15427 465 aaKnown RBP10.69□□□□□ -0.7
GGA3-209ENST00000580646 ADH1AP07327 375 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 WEE2P0C1S8 567 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 ERCC5P28715 1186 aaPredicted RBP10.69□□□□□ -0.7
GGA3-209ENST00000580646 MTHFRP42898 656 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 CYP2J2P51589 502 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 AP3M2P53677 418 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 CLDN10P78369 228 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 CYP24A1Q07973 514 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 ADAM9Q13443 819 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 TMEM132DQ14C87 1099 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 PSMD6Q15008 389 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 UPP1Q16831 310 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 GLRA4Q5JXX5 417 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 ISM2Q6H9L7 571 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 JADE1Q6IE81 842 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 DCLRE1AQ6PJP8 1040 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 TMC5Q6UXY8 1006 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 CBWD2Q8IUF1 395 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 WDR49Q8IV35 697 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 ZSWIM2Q8NEG5 633 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 BEST2Q8NFU1 509 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 CACTINQ8WUQ7 758 aaKnown RBP10.69□□□□□ -0.7
GGA3-209ENST00000580646 KIF12Q96FN5 646 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 B3GALT6Q96L58 329 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 CEP63Q96MT8 703 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 POMKQ9H5K3 350 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.69□□□□□ -0.7
GGA3-209ENST00000580646 RWDD2AQ9UIY3 292 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 FRMD4BQ9Y2L6 1034 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 TSC2P49815 1807 aa10.69□□□□□ -0.7
GGA3-209ENST00000580646 MTCL1Q9Y4B5 1905 aaKnown RBP10.68□□□□□ -0.7
GGA3-209ENST00000580646 SF3B1O75533 1304 aaKnown RBP eCLIP10.68□□□□□ -0.76e-8■■■■■ 80.2
GGA3-209ENST00000580646 GOLGA8IPA6NC78 632 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 GOLGA8JA6NMD2 632 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 PRR33A8MZF0 331 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 IKBKBO14920 756 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 KIF4AO95239 1232 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 GLUD1P00367 558 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 NFICP08651 508 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 PSMC2P35998 433 aaKnown RBP10.68□□□□□ -0.7
GGA3-209ENST00000580646 PMS1P54277 932 aaKnown RBP10.68□□□□□ -0.7
GGA3-209ENST00000580646 SOX4Q06945 474 aaPredicted RBP10.68□□□□□ -0.7
GGA3-209ENST00000580646 ELAVL2Q12926 359 aaKnown RBP10.68□□□□□ -0.7
GGA3-209ENST00000580646 FAM171A1Q5VUB5 890 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 ANKRD40Q6AI12 368 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 TTI2Q6NXR4 508 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 INTS8Q75QN2 995 aaKnown RBP10.68□□□□□ -0.7
GGA3-209ENST00000580646 GPR149Q86SP6 731 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 EFCAB13Q8IY85 973 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 TMC2Q8TDI7 906 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 PARD3BQ8TEW8 1205 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 HASPINQ8TF76 798 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 NELFBQ8WX92 580 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 RIN2Q8WYP3 895 aaPredicted RBP10.68□□□□□ -0.7
GGA3-209ENST00000580646 EDAQ92838 391 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 SFXN1Q9H9B4 322 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 FNIP2Q9P278 1114 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 NR2E1Q9Y466 385 aa10.68□□□□□ -0.7
GGA3-209ENST00000580646 ANO9A1A5B4 782 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 TRIM49BA6NDI0 452 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 PODXLO00592 558 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 AKAP3O75969 853 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 FGFR1OPO95684 399 aaKnown RBP10.67□□□□□ -0.7
GGA3-209ENST00000580646 GNA14O95837 355 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 C1RP00736 705 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 EPB41P11171 864 aaKnown RBP10.67□□□□□ -0.7
GGA3-209ENST00000580646 SP100P23497 879 aaPredicted RBP10.67□□□□□ -0.7
GGA3-209ENST00000580646 CASP4P49662 377 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 CLCNKBP51801 687 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 MARSP56192 900 aaKnown RBP10.67□□□□□ -0.7
GGA3-209ENST00000580646 WNT7BP56706 349 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 GSE1Q14687 1217 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 NFKBIBQ15653 356 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 STX1AQ16623 288 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 DPCR1Q3MIW9 517 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 RTP2Q5QGT7 225 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 CEP135Q66GS9 1140 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 CAVIN1Q6NZI2 390 aaKnown RBP10.67□□□□□ -0.7
GGA3-209ENST00000580646 ELMSAN1Q6PJG2 1045 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 SASS6Q6UVJ0 657 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 PRSS55Q6UWB4 352 aaPredicted RBP10.67□□□□□ -0.7
GGA3-209ENST00000580646 FILIP1Q7Z7B0 1213 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 CEP57Q86XR8 500 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 PALB2Q86YC2 1186 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 FAM186BQ8IYM0 893 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms