RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 YIPF1Q9Y548 306 aa10□□□□□ -0.81
CDK5RAP3-211ENST00000578996 R4GN57 208 aa10□□□□□ -0.81
CDK5RAP3-211ENST00000578996 TRIP11Q15643 1979 aa10□□□□□ -0.81
CDK5RAP3-211ENST00000578996 COL4A3Q01955 1670 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 MYH11P35749 1972 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 DOCK8Q8NF50 2099 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 A0A0B4J269 797 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 KANSL1LA0AUZ9 987 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 ANKRD63C9JTQ0 380 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 M0QZQ0 153 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 FAM189A1O60320 539 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 ECI2O75521 394 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 NFICP08651 508 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 ABCD1P33897 745 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 CCR2P41597 374 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 STARD6P59095 220 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 GTF2BQ00403 316 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 PRKCQQ04759 706 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 DUSP4Q13115 394 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 RESTQ13127 1097 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 ZBTB6Q15916 424 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 PRSS36Q5K4E3 855 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 RRAGBQ5VZM2 374 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 OVOS1Q6IE37 1185 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SLC39A4Q6P5W5 647 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SFR1Q86XK3 245 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 C1orf210Q8IVY1 113 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 ADSSL1Q8N142 457 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 NOC3LQ8WTT2 800 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 POMGNT1Q8WZA1 660 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 FIZ1Q96SL8 496 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 BCO2Q9BYV7 579 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 IKZF4Q9H2S9 585 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 BRD9Q9H8M2 597 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 MRPL44Q9H9J2 332 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 ZFP14Q9HCL3 533 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 AVENQ9NQS1 362 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 HEBP1Q9NRV9 189 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SPATA6Q9NWH7 488 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 CEP72Q9P209 647 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 STK17AQ9UEE5 414 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 FBXO2Q9UK22 296 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 CPSF3Q9UKF6 684 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 AGO2Q9UKV8 859 aaKnown RBP9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SLC27A5Q9Y2P5 690 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 MTF2Q9Y483 593 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 PIEZO1Q92508 2521 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 CITO14578 2027 aa9.99□□□□□ -0.81
CDK5RAP3-211ENST00000578996 MYH15Q9Y2K3 1946 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 OR6C75A6NL08 312 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 FAM170BA6NMN3 283 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 NRG2O14511 850 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 GCNT3O95395 438 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 IDEP14735 1019 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 GLULP15104 373 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SYT1P21579 422 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 ALDH1A3P47895 512 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 EPHB3P54753 998 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 PLD1Q13393 1074 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 PTPAQ15257 358 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 TEAD2Q15562 447 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 FAM78AQ5JUQ0 283 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SPATA1Q5VX52 437 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 C9orf57Q5W0N0 161 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SLFN12LQ6IEE8 588 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 ARMCX5Q6P1M9 558 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 POTEHQ6S545 545 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SV2BQ7L1I2 683 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 CD302Q8IX05 232 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 FAM200AQ8TCP9 573 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 ELSPBP1Q96BH3 223 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SENP8Q96LD8 212 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 ZSWIM3Q96MP5 696 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 TMEM209Q96SK2 561 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SEPT5Q99719 369 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 HINFPQ9BQA5 517 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 OXCT2Q9BYC2 517 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 PANK2Q9BZ23 570 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 LTB4R2Q9NPC1 389 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 DLGAP2Q9P1A6 1054 aa9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SRPRBQ9Y5M8 271 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 PDCD11Q14690 1871 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-211ENST00000578996 A0A1W2PRU2 124 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 MTMR11A4FU01 709 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 MYMKA6NI61 221 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SPTLC1O15269 473 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 LAMTOR5O43504 91 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SOAT2O75908 522 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 OAZ2O95190 189 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 SP9P0CG40 484 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 TYMPP19971 482 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 FCARP24071 287 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 GDI1P31150 447 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 VIPR2P41587 438 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 STAT6P42226 847 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 AARSP49588 968 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 LILRA4P59901 499 aa9.97□□□□□ -0.81
CDK5RAP3-211ENST00000578996 GPR17Q13304 367 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms