RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 FAM49AQ9H0Q0 323 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 POLR3FQ9H1D9 316 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TNMDQ9H2S6 317 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 IKZF4Q9H2S9 585 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 FZD8Q9H461 694 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 CUEDC2Q9H467 287 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ST6GALNAC4Q9H4F1 302 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ATP6V0A4Q9HBG4 840 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 IL23AQ9NPF7 189 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 RNF19AQ9NV58 838 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 KCND2Q9NZV8 630 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 CXXC1Q9P0U4 656 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 SUCLA2Q9P2R7 463 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TCEAL9Q9UHQ7 104 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 KCNH3Q9ULD8 1083 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ODF2LQ9ULJ1 636 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 DNM3Q9UQ16 869 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 USP20Q9Y2K6 914 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 NOC2LQ9Y3T9 749 aaKnown RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ATP6V1DQ9Y5K8 247 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 COL4A3BPQ9Y5P4 624 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 NOTCH4Q99466 2003 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ANAPC1Q9H1A4 1944 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 EYSQ5T1H1 3165 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 ARHGEF35A5YM69 484 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 C9IYK1 514 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 NPIPB6E9PJ23 425 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 POLR2DO15514 142 aaKnown RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 B4GALT5O43286 388 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 CSDE1O75534 798 aaKnown RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 PIGRP01833 764 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 KRT1P04264 644 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 RPLP2P05387 115 aaKnown RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 PFKMP08237 780 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 SLFN14P0C7P3 912 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 ACRP10323 421 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 GHRP10912 638 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 PLS3P13797 630 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 RAG1P15918 1043 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 BMP6P22004 513 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 FGFR4P22455 802 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 EIF4BP23588 611 aaKnown RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 CD52P31358 61 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 RFC2P35250 354 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 STAT6P42226 847 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 NAMPTP43490 491 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 NPTX2P47972 431 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 SARSP49591 514 aaKnown RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 POLGP54098 1239 aaPredicted RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 CHMP4BP1P59074 171 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 WDR5P61964 334 aaKnown RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 CLDN10P78369 228 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 FAM189BP81408 668 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 DEFB103AP81534 67 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 FPGSQ05932 587 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 FAM160A1Q05DH4 1040 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 DPYDQ12882 1025 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 BFSP2Q13515 415 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 CUL4BQ13620 913 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 MAP7Q14244 749 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 SHHQ15465 462 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 NT5DC1Q5TFE4 455 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 RRAGBQ5VZM2 374 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 EEF1DP3Q658K8 133 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 FAM109BQ6ICB4 259 aaPredicted RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 CNKSR3Q6P9H4 555 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 KRBA2Q6ZNG9 492 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 CCDC73Q6ZRK6 1079 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 RBM43Q6ZSC3 357 aaKnown RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 ZNF365Q70YC5 407 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 GGNQ86UU5 652 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 GPBP1Q86WP2 473 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 ELOA2Q8IYF1 753 aaPredicted RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 RGL4Q8IZJ4 473 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 PDILTQ8N807 584 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 FSIP1Q8NA03 581 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 KIAA0895Q8NCT3 520 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 DBF4BQ8NFT6 615 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 OR13H1Q8NG92 308 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 GPT2Q8TD30 523 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 TCP11Q8WWU5 503 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 PSPC1Q8WXF1 523 aaKnown RBP4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 SLC7A3Q8WY07 619 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 HERVK_113Q902F9 699 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 HPS3Q969F9 1004 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 VTI1AQ96AJ9 217 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 DHX58Q96C10 678 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 CALML4Q96GE6 196 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 PAGE5Q96GU1 130 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 TIGD1Q96MW7 591 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 MED15Q96RN5 788 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 C7orf25Q9BPX7 421 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 TIPINQ9BVW5 301 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 PANK2Q9BZ23 570 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 ZMYND15Q9H091 742 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 CXCL16Q9H2A7 254 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 RASSF4Q9H2L5 321 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 MAGEF1Q9HAY2 307 aa4.18□□□□□ -1.74
SMARCE1-215ENST00000578995 PTPRHQ9HD43 1115 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms