RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 GPR149Q86SP6 731 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 C1orf127Q8N9H9 656 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 KREMEN2Q8NCW0 462 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 CXorf38Q8TB03 319 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 SPATA20Q8TB22 786 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 NOC3LQ8WTT2 800 aaKnown RBP15.63■□□□□ 0.09
MKS1-207ENST00000578789 CACTINQ8WUQ7 758 aaKnown RBP15.63■□□□□ 0.09
MKS1-207ENST00000578789 RIPOR3Q96MK2 946 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 ZNF560Q96MR9 790 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 PHF7Q9BWX1 381 aaPredicted RBP15.63■□□□□ 0.09
MKS1-207ENST00000578789 DMAC2Q9NW81 257 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 ZDHHC7Q9NXF8 308 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 CDY1Q9Y6F8 540 aa15.63■□□□□ 0.09
MKS1-207ENST00000578789 SPTLC1O15269 473 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 ABCB7O75027 752 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 GADD45BO75293 160 aaPredicted RBP15.62■□□□□ 0.09
MKS1-207ENST00000578789 OR1D2P34982 312 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 TAF6P49848 677 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 CYP24A1Q07973 514 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 MYBPC2Q14324 1141 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 PSMD6Q15008 389 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 NFIL3Q16649 462 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 TMC5Q6UXY8 1006 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 DSTYKQ6XUX3 929 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 WDR49Q8IV35 697 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 GJD3Q8N144 294 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 GUF1Q8N442 669 aaKnown RBP15.62■□□□□ 0.09
MKS1-207ENST00000578789 FEZF2Q8TBJ5 459 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 GSDMAQ96QA5 445 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 OXCT2Q9BYC2 517 aaPredicted RBP15.62■□□□□ 0.09
MKS1-207ENST00000578789 MTMR12Q9C0I1 747 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 CD320Q9NPF0 282 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 INTS13Q9NVM9 706 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 RMND1Q9NWS8 449 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 CDH22Q9UJ99 828 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 FBXL5Q9UKA1 691 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 ITGA11Q9UKX5 1188 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 TRAF3IP3Q9Y228 551 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 PTPRJQ12913 1337 aa15.62■□□□□ 0.09
MKS1-207ENST00000578789 ARHGEF37A1IGU5 675 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 SPDYE4A6NLX3 237 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 LOC730098B7Z3J9 87 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 ZMYND10O75800 440 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 OAZ2O95190 189 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 ITGB3P05106 788 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 CYP11A1P05108 521 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 TMEM191BP0C7N4 346 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 SPATA31D3P0C874 917 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 ODC1P11926 461 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 HOXA9P31269 272 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 PNPLA4P41247 253 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 ROR1Q01973 937 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 YWHAHQ04917 246 aaPredicted RBP15.61■□□□□ 0.09
MKS1-207ENST00000578789 SV2CQ496J9 727 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 CTXN3Q4LDR2 81 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 ATAT1Q5SQI0 421 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 SPATA31D4Q6ZUB0 917 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 LRRC52Q8N7C0 313 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 ZNF707Q96C28 371 aaPredicted RBP15.61■□□□□ 0.09
MKS1-207ENST00000578789 BORCS6Q96GS4 357 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 ANKRD36BP1Q96IX9 119 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 SENP8Q96LD8 212 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 MFSD14AQ96MC6 490 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 CGRRF1Q99675 332 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 GZF1Q9H116 711 aaPredicted RBP15.61■□□□□ 0.09
MKS1-207ENST00000578789 POMKQ9H5K3 350 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 SIX4Q9UIU6 781 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 HOOK1Q9UJC3 728 aaKnown RBP15.61■□□□□ 0.09
MKS1-207ENST00000578789 VCANP13611 3396 aa15.61■□□□□ 0.09
MKS1-207ENST00000578789 WDR27A2RRH5 827 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 CALUO43852 315 aaPredicted RBP15.6■□□□□ 0.09
MKS1-207ENST00000578789 EXOC3O60645 756 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 KINO60870 393 aaKnown RBP15.6■□□□□ 0.09
MKS1-207ENST00000578789 PRPF40AO75400 957 aaKnown RBP15.6■□□□□ 0.09
MKS1-207ENST00000578789 RFPL2O75678 378 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 ABLIM3O94929 683 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 SMC2O95347 1197 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 NR3C1P04150 777 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 POU2F2P09086 479 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 WEE2P0C1S8 567 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 POLR2BP30876 1174 aaKnown RBP15.6■□□□□ 0.09
MKS1-207ENST00000578789 UBE2HP62256 183 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 COBLL1Q53SF7 1204 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 LIN9Q5TKA1 542 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 LMBRD2Q68DH5 695 aaPredicted RBP15.6■□□□□ 0.09
MKS1-207ENST00000578789 RTL10Q7L3V2 364 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 RDH13Q8NBN7 331 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 OR5B17Q8NGF7 314 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 ZNF461Q8TAF7 563 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 FAM84AQ96KN4 292 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 PRKD2Q9BZL6 878 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 DSEQ9UL01 958 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 PCDHA5Q9Y5H7 936 aa15.6■□□□□ 0.09
MKS1-207ENST00000578789 BDP1A6H8Y1 2624 aa15.59■□□□□ 0.09
MKS1-207ENST00000578789 CCDC195A0A1B0GUA6 201 aa15.59■□□□□ 0.09
MKS1-207ENST00000578789 OR6C75A6NL08 312 aa15.59■□□□□ 0.09
MKS1-207ENST00000578789 KPNA7A9QM74 516 aa15.59■□□□□ 0.09
MKS1-207ENST00000578789 TNNC2P02585 160 aa15.59■□□□□ 0.09
MKS1-207ENST00000578789 C8AP07357 584 aa15.59■□□□□ 0.09
MKS1-207ENST00000578789 HNRNPA1P09651 372 aaKnown RBP eCLIP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms