RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 PRPF3O43395 683 aaKnown RBP7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TRAPPC3O43617 180 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 NPTXRO95502 500 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CCDC192P0DO97 292 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ATF2P15336 505 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 RPS6KB1P23443 525 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PSMA5P28066 241 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ELF1P32519 619 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CCR2P41597 374 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 KPNA1P52294 538 aaPredicted RBP7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SIM1P81133 766 aaPredicted RBP7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CAPSQ13938 189 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ELF2Q15723 593 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PLK5Q496M5 336 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TPGS2Q68CL5 300 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 BLOC1S2Q6QNY1 142 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PPP4R3CPQ6ZMV5 832 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 DHX32Q7L7V1 743 aaKnown RBP7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 OTUD6AQ7L8S5 288 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 FAM177A1Q8N128 213 aaPredicted RBP7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ELMOD1Q8N336 334 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CAMKK1Q8N5S9 505 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ZNF579Q8NAF0 562 aaKnown RBP7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ZSCAN18Q8TBC5 510 aaPredicted RBP7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 FAM200AQ8TCP9 573 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TBCKQ8TEA7 893 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 GJA10Q969M2 543 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 UROC1Q96N76 676 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TM6SF1Q9BZW5 370 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ZSWIM6Q9HCJ5 1215 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 XPNPEP1Q9NQW7 623 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 C2orf42Q9NWW7 574 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 KLK14Q9P0G3 267 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CACNG4Q9UBN1 327 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 INSL5Q9Y5Q6 135 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 NCANO14594 1321 aa7.92□□□□□ -1.14
CDK5RAP3-209ENST00000578663 KLF18A0A0U1RQI7 1052 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 BCLAF3A2AJT9 711 aaKnown RBP7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SLC38A8A6NNN8 435 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 H0Y626 953 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 EML1O00423 815 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 NRG2O14511 850 aaPredicted RBP7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ATG13O75143 517 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 MOSPD3O75425 235 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 RECQL4O94761 1208 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 B3GAT3O94766 335 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 RHOBTB1O94844 696 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TRIM16O95361 564 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TDP2O95551 362 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 GP1BBP13224 206 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 YWHABP31946 246 aaKnown RBP7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 VIPR2P41587 438 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 FAM193AP78312 1265 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PLCB2Q00722 1185 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 FAM187BQ17R55 369 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ARHGAP29Q52LW3 1261 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 IQCEQ6IPM2 695 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TXNDC11Q6PKC3 985 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CCNI2Q6ZMN8 369 aaPredicted RBP7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 Q6ZUG5 572 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 RUFY3Q7L099 469 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 C11orf74Q86VG3 221 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 YAF2Q8IY57 180 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PIP4K2CQ8TBX8 421 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 FAM20AQ96MK3 541 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ZSWIM3Q96MP5 696 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 LXNQ9BS40 222 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 RNF26Q9BY78 433 aaPredicted RBP7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TMEM9BQ9NQ34 198 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SH3GLB2Q9NR46 395 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ASAH2Q9NR71 780 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PRMT7Q9NVM4 692 aaPredicted RBP7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 OBP2AQ9NY56 170 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 WRAP73Q9P2S5 460 aaPredicted RBP7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ANKMY1Q9P2S6 941 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 DKK4Q9UBT3 224 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 VAV3Q9UKW4 847 aa7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 NUP210Q8TEM1 1887 aaPredicted RBP7.91□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CENPEQ02224 2701 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CAPN8A6NHC0 703 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SYN3O14994 580 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 N4BP3O15049 544 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 B4GALT5O43286 388 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 EXTL3O43909 919 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 DGAT1O75907 488 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CAVIN2O95810 425 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 HMGB1P09429 215 aaKnown RBP7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 TKTP29401 623 aaKnown RBP7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ADD1P35611 737 aaKnown RBP7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 ARL2P36404 184 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SOX9P48436 509 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CSRP3P50461 194 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 AKAP17AQ02040 695 aaKnown RBP7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 EPHA7Q15375 998 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 XKR9Q5GH70 373 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 CDCA2Q69YH5 1023 aaPredicted RBP7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 HAUS6Q7Z4H7 955 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 PIP4P1Q86T03 277 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SCUBE3Q8IX30 993 aa7.9□□□□□ -1.14
CDK5RAP3-209ENST00000578663 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms