RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 MTMR12Q9C0I1 747 aa12.43□□□□□ -0.42
ERBB2-208ENST00000578630 CLDND1Q9NY35 253 aa12.43□□□□□ -0.42
ERBB2-208ENST00000578630 RWDD2AQ9UIY3 292 aa12.43□□□□□ -0.42
ERBB2-208ENST00000578630 DSEQ9UL01 958 aa12.43□□□□□ -0.42
ERBB2-208ENST00000578630 CTNND2Q9UQB3 1225 aa12.43□□□□□ -0.42
ERBB2-208ENST00000578630 CHD7Q9P2D1 2997 aa12.43□□□□□ -0.42
ERBB2-208ENST00000578630 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 TRIM49BA6NDI0 452 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 LRRIQ3A6PVS8 624 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 CYB561D2O14569 222 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 SLC16A3O15427 465 aaKnown RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 TEX28O15482 410 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 HUS1O60921 280 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 CLASP2O75122 1294 aaKnown RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 LETM1O95202 739 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 ODC1P11926 461 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 TYMPP19971 482 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 ERCC5P28715 1186 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 TKTP29401 623 aaKnown RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 ATICP31939 592 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 GTF2H1P32780 548 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 NDUFV1P49821 464 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 BFSP1Q12934 665 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 BIRC3Q13489 604 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 PSMD5Q16401 504 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 AAK1Q2M2I8 961 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 SKOR2Q2VWA4 1001 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 VARS2Q5ST30 1063 aaKnown RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 TTI2Q6NXR4 508 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 TMEM184AQ6ZMB5 413 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 FRMD5Q7Z6J6 570 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 THEM5Q8N1Q8 247 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 ZNF516Q92618 1163 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 CASP10Q92851 521 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 EEF2KMTQ96G04 330 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 HPDLQ96IR7 371 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 B3GALT6Q96L58 329 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 SRRTQ9BXP5 876 aaKnown RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 ARMCX3Q9UH62 379 aaPredicted RBP12.42□□□□□ -0.42
ERBB2-208ENST00000578630 BACE2Q9Y5Z0 518 aa12.42□□□□□ -0.42
ERBB2-208ENST00000578630 PPEF2O14830 753 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 OAZ2O95190 189 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 CST3P01034 146 aaPredicted RBP12.41□□□□□ -0.42
ERBB2-208ENST00000578630 C4BPAP04003 597 aaKnown RBP12.41□□□□□ -0.42
ERBB2-208ENST00000578630 GTF2F1P35269 517 aaKnown RBP eCLIP12.41□□□□□ -0.42
ERBB2-208ENST00000578630 DLG4P78352 724 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 MRPL58Q14197 206 aaKnown RBP12.41□□□□□ -0.42
ERBB2-208ENST00000578630 CTC1Q2NKJ3 1217 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 SGSM1Q2NKQ1 1148 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 CCDC40Q4G0X9 1142 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 CTXN3Q4LDR2 81 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 ZNF280DQ6N043 979 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 PRSS55Q6UWB4 352 aaPredicted RBP12.41□□□□□ -0.42
ERBB2-208ENST00000578630 RBM43Q6ZSC3 357 aaKnown RBP12.41□□□□□ -0.42
ERBB2-208ENST00000578630 DPH6Q7L8W6 267 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 ZC3H3Q8IXZ2 948 aaKnown RBP12.41□□□□□ -0.42
ERBB2-208ENST00000578630 TMEM130Q8N3G9 435 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 BORCS6Q96GS4 357 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 DUSP9Q99956 384 aaKnown RBP12.41□□□□□ -0.42
ERBB2-208ENST00000578630 ANO10Q9NW15 660 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 MTRRQ9UBK8 725 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 SIX4Q9UIU6 781 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 KIAA1671Q9BY89 1806 aa12.41□□□□□ -0.42
ERBB2-208ENST00000578630 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 SPTLC1O15269 473 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 GLUD1P00367 558 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 CYP11A1P05108 521 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 FAM163BP0C2L3 166 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 CCDC192P0DO97 292 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 HOXB8P17481 243 aaPredicted RBP12.4□□□□□ -0.42
ERBB2-208ENST00000578630 OR1D2P34982 312 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 MCCD1P59942 119 aaPredicted RBP12.4□□□□□ -0.42
ERBB2-208ENST00000578630 RAB33AQ14088 237 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 COL19A1Q14993 1142 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 KLHL40Q2TBA0 621 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 ZACNQ401N2 412 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 TCERG1LQ5VWI1 586 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 OVOS1Q6IE37 1185 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 CAVIN1Q6NZI2 390 aaKnown RBP12.4□□□□□ -0.42
ERBB2-208ENST00000578630 LLGL2Q6P1M3 1020 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 SV2AQ7L0J3 742 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 PALB2Q86YC2 1186 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 CREBRFQ8IUR6 639 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 TMEM86AQ8N2M4 240 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 CCDC150Q8NCX0 1101 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 CXorf38Q8TB03 319 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 PLEKHO2Q8TD55 490 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 SLC22A17Q8WUG5 538 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 HDAC7Q8WUI4 952 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 CLSTN3Q9BQT9 956 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 UBE2ZQ9H832 354 aaPredicted RBP12.4□□□□□ -0.42
ERBB2-208ENST00000578630 GDAP2Q9NXN4 497 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 THEGQ9P2T0 379 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 TIMM13Q9Y5L4 95 aaPredicted RBP12.4□□□□□ -0.42
ERBB2-208ENST00000578630 SNX9Q9Y5X1 595 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 HCFC2Q9Y5Z7 792 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 PLXNA4Q9HCM2 1894 aa12.4□□□□□ -0.42
ERBB2-208ENST00000578630 PTPRJQ12913 1337 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 OR6C75A6NL08 312 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms