RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 HTATIP2Q9BUP3 242 aa14.4□□□□□ -0.1
SRSF1-202ENST00000578430 GPR88Q9GZN0 384 aa14.4□□□□□ -0.1
SRSF1-202ENST00000578430 TUBGCP4Q9UGJ1 667 aa14.4□□□□□ -0.1
SRSF1-202ENST00000578430 AJAP1Q9UKB5 411 aaPredicted RBP14.4□□□□□ -0.1
SRSF1-202ENST00000578430 LRFN2Q9ULH4 789 aa14.4□□□□□ -0.1
SRSF1-202ENST00000578430 MEIS3P2A8K0S8 358 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 FOXN3O00409 490 aaPredicted RBP14.39□□□□□ -0.11
SRSF1-202ENST00000578430 GFPT2O94808 682 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 CLSTN1O94985 981 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 FAM163BP0C2L3 166 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 CYLC1P35663 651 aaPredicted RBP14.39□□□□□ -0.11
SRSF1-202ENST00000578430 SCNN1GP51170 649 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 BPIFB4P59827 614 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 TNNC1P63316 161 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 KLHL30Q0D2K2 578 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 NAB2Q15742 525 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 SV2CQ496J9 727 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 NOMO2Q5JPE7 1267 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 SPOPLQ6IQ16 392 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 IRF2BP2Q7Z5L9 587 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 DEFB128Q7Z7B8 93 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 BCO2Q9BYV7 579 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 CXCL16Q9H2A7 254 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 CNTN6Q9UQ52 1028 aa14.39□□□□□ -0.11
SRSF1-202ENST00000578430 SCN5AQ14524 2016 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.38□□□□□ -0.11
SRSF1-202ENST00000578430 EVI5O60447 810 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 BAIAP3O94812 1187 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 TAF6P49848 677 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 GUCY2FP51841 1108 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 PPIGQ13427 754 aaKnown RBP eCLIP14.38□□□□□ -0.116e-26■■□□□ 12.4
SRSF1-202ENST00000578430 TUSC3Q13454 348 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 WDR72Q3MJ13 1102 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 E4F1Q66K89 784 aaPredicted RBP14.38□□□□□ -0.11
SRSF1-202ENST00000578430 HGSNATQ68CP4 663 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 VPS36Q86VN1 386 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 ZSCAN30Q86W11 494 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 ABI1Q8IZP0 508 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 KAT5Q92993 513 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 CCDC42Q96M95 316 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 NHEJ1Q9H9Q4 299 aaPredicted RBP14.38□□□□□ -0.11
SRSF1-202ENST00000578430 IL23AQ9NPF7 189 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 MIOSQ9NXC5 875 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 GDAP2Q9NXN4 497 aa14.38□□□□□ -0.11
SRSF1-202ENST00000578430 TTC3P53804 2025 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 CCP110O43303 1012 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 IPO7O95373 1038 aaKnown RBP14.37□□□□□ -0.11
SRSF1-202ENST00000578430 ACO1P21399 889 aaKnown RBP14.37□□□□□ -0.11
SRSF1-202ENST00000578430 ASPAP45381 313 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
SRSF1-202ENST00000578430 TCTN1Q2MV58 587 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 TDRD12Q587J7 1177 aaKnown RBP14.37□□□□□ -0.11
SRSF1-202ENST00000578430 CLLU1OSQ5K130 101 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 DPH6Q7L8W6 267 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 CRIPAKQ8N1N5 446 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 UBR7Q8N806 425 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 TET1Q8NFU7 2136 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 VWCEQ96DN2 955 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 CHP1Q99653 195 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 MRPL9Q9BYD2 267 aaKnown RBP14.37□□□□□ -0.11
SRSF1-202ENST00000578430 DNAI2Q9GZS0 605 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 DEF6Q9H4E7 631 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.37□□□□□ -0.111e-6■■□□□ 14.2
SRSF1-202ENST00000578430 RNF19AQ9NV58 838 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 ARHGAP20Q9P2F6 1191 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 NXF1Q9UBU9 619 aaKnown RBP14.37□□□□□ -0.11
SRSF1-202ENST00000578430 INPP5FQ9Y2H2 1132 aa14.37□□□□□ -0.11
SRSF1-202ENST00000578430 MICAL3Q7RTP6 2002 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 ARHGEF37A1IGU5 675 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 KPNA7A9QM74 516 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 EIF3CLB5ME19 914 aaKnown RBP14.36□□□□□ -0.11
SRSF1-202ENST00000578430 PODXLO00592 558 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 POMCP01189 267 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 AMHP03971 560 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 KRT5P13647 590 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 CSF2RAP15509 400 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 ITGB8P26012 769 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 EIF4A3P38919 411 aaKnown RBP14.36□□□□□ -0.11
SRSF1-202ENST00000578430 USP8P40818 1118 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 AFF1P51825 1210 aaKnown RBP14.36□□□□□ -0.11
SRSF1-202ENST00000578430 ARID5AQ03989 594 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 PTK2Q05397 1052 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 SCARA3Q6AZY7 606 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 ZNF677Q86XU0 584 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 KIAA1524Q8TCG1 905 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 EIF3CQ99613 913 aaKnown RBP14.36□□□□□ -0.11
SRSF1-202ENST00000578430 KCND1Q9NSA2 647 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 CISHQ9NSE2 258 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 PCDHB4Q9Y5E5 795 aa14.36□□□□□ -0.11
SRSF1-202ENST00000578430 EPN1Q9Y6I3 576 aaPredicted RBP14.36□□□□□ -0.11
SRSF1-202ENST00000578430 SOWAHDA6NJG2 315 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 AKR1B10O60218 316 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 TACC1O75410 805 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 NDUFA10O95299 355 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 LCA5LO95447 670 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 IBSPP21815 317 aaPredicted RBP14.35□□□□□ -0.11
SRSF1-202ENST00000578430 CLCN1P35523 988 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 LILRA4P59901 499 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 KRT83P78385 493 aa14.35□□□□□ -0.11
SRSF1-202ENST00000578430 RNASELQ05823 741 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms