RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TMEM199Q8N511 208 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 CEP120Q8N960 986 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 KDF1Q8NAX2 398 aaPredicted RBP8.67□□□□□ -1.02
COPS3-215ENST00000578317 SMG8Q8ND04 991 aaKnown RBP8.67□□□□□ -1.02
COPS3-215ENST00000578317 PLEKHO2Q8TD55 490 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 VWCEQ96DN2 955 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 MRFAP1L1Q96HT8 127 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 ADAM2Q99965 735 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 VPS16Q9H269 839 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 ELAC1Q9H777 363 aaKnown RBP8.67□□□□□ -1.02
COPS3-215ENST00000578317 UBN1Q9NPG3 1134 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 GIT1Q9Y2X7 761 aa8.67□□□□□ -1.02
COPS3-215ENST00000578317 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.67□□□□□ -1.02
COPS3-215ENST00000578317 A0A1W2PQC6 194 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 MGEA5O60502 916 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 ZIC2O95409 532 aaPredicted RBP8.66□□□□□ -1.02
COPS3-215ENST00000578317 NPTXRO95502 500 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 AFPP02771 609 aaKnown RBP8.66□□□□□ -1.02
COPS3-215ENST00000578317 RAG1P15918 1043 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 ITGB8P26012 769 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 TNFSF9P41273 254 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 WDR4P57081 412 aaKnown RBP8.66□□□□□ -1.02
COPS3-215ENST00000578317 TAGLNQ01995 201 aaKnown RBP8.66□□□□□ -1.02
COPS3-215ENST00000578317 ZBTB6Q15916 424 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 TMC7Q7Z402 723 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 CREBRFQ8IUR6 639 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 WDR49Q8IV35 697 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 TMEM192Q8IY95 271 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 CRIPAKQ8N1N5 446 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 RSPH1Q8WYR4 309 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 PGBD4Q96DM1 585 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 SCLYQ96I15 445 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 CITED4Q96RK1 184 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 FNBP1Q96RU3 617 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 TRIM5Q9C035 493 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 XPO4Q9C0E2 1151 aaKnown RBP8.66□□□□□ -1.02
COPS3-215ENST00000578317 RAB6BQ9NRW1 208 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 TOPORSQ9NS56 1045 aaPredicted RBP8.66□□□□□ -1.02
COPS3-215ENST00000578317 SNTG2Q9NY99 539 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 TAB2Q9NYJ8 693 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 IFNKQ9P0W0 207 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 DERAQ9Y315 318 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 COQ4Q9Y3A0 265 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 C2CD2Q9Y426 696 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 IPPQ9Y573 584 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 EVPLQ92817 2033 aa8.66□□□□□ -1.02
COPS3-215ENST00000578317 ABHD14A-ACY1A0A1B0GW23 586 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 LRRIQ3A6PVS8 624 aaPredicted RBP8.65□□□□□ -1.02
COPS3-215ENST00000578317 LACTBL1A8MY62 500 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 INPPL1O15357 1258 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 MEFVO15553 781 aaPredicted RBP8.65□□□□□ -1.02
COPS3-215ENST00000578317 EFCAB14O75071 495 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 N4BP1O75113 896 aaKnown RBP8.65□□□□□ -1.02
COPS3-215ENST00000578317 C4BPAP04003 597 aaKnown RBP8.65□□□□□ -1.02
COPS3-215ENST00000578317 HARSP12081 509 aaKnown RBP8.65□□□□□ -1.02
COPS3-215ENST00000578317 KCNE1P15382 129 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 PBX1P40424 430 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 FMO5P49326 533 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 ZNF75DP51815 510 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 YARSP54577 528 aaKnown RBP8.65□□□□□ -1.02
COPS3-215ENST00000578317 DLG4P78352 724 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 DUOXA2Q1HG44 320 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 SEZ6Q53EL9 994 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 COX20Q5RI15 118 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 CNKSR3Q6P9H4 555 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 C15orf39Q6ZRI6 1047 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 SV2AQ7L0J3 742 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 ECHDC2Q86YB7 292 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 CCDC127Q96BQ5 260 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 ERGIC2Q96RQ1 377 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 TMEM8AQ9HCN3 771 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 PDE11AQ9HCR9 933 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 INTS13Q9NVM9 706 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 CNTN3Q9P232 1028 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 STIM2Q9P246 746 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 PRKAG2Q9UGJ0 569 aa8.65□□□□□ -1.02
COPS3-215ENST00000578317 CDK2AP1O14519 115 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 TEX33O43247 280 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 RECQL4O94761 1208 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 ADCY5O95622 1261 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 CXCL8P10145 99 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 ITGA4P13612 1032 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 ATF7P17544 494 aaPredicted RBP8.65□□□□□ -1.03
COPS3-215ENST00000578317 TNNI1P19237 187 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 CDC25BP30305 580 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 OSTNP61366 133 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 UBXN1Q04323 297 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 PPP3CAQ08209 521 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 CETN1Q12798 172 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 IKBKEQ14164 716 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 TLR1Q15399 786 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 ZACNQ401N2 412 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 FKBP15Q5T1M5 1219 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 TCERG1LQ5VWI1 586 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 KRT39Q6A163 491 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 AGMOQ6ZNB7 445 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 Q6ZVU0 165 aa8.65□□□□□ -1.03
COPS3-215ENST00000578317 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.65□□□□□ -1.03
COPS3-215ENST00000578317 CACTINQ8WUQ7 758 aaKnown RBP8.65□□□□□ -1.03
COPS3-215ENST00000578317 LINC01599Q8WXQ3 324 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms