RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 DDX27Q96GQ7 796 aaKnown RBP13.87□□□□□ -0.19
CCDC57-211ENST00000578187 SMOC2Q9H3U7 446 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 RPF1Q9H9Y2 349 aaKnown RBP13.87□□□□□ -0.19
CCDC57-211ENST00000578187 EXOC1Q9NV70 894 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 FBXW11Q9UKB1 542 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.87□□□□□ -0.19
CCDC57-211ENST00000578187 MUC6Q6W4X9 2439 aa13.87□□□□□ -0.19
CCDC57-211ENST00000578187 MTCL1Q9Y4B5 1905 aaKnown RBP13.86□□□□□ -0.19
CCDC57-211ENST00000578187 PAPLNO95428 1278 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 HOXA9P31269 272 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 ACOT2P49753 483 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 CLCNKBP51801 687 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 PSMD2Q13200 908 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 ZBTB6Q15916 424 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 UPP1Q16831 310 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 CRELD2Q6UXH1 353 aaPredicted RBP13.86□□□□□ -0.19
CCDC57-211ENST00000578187 CD302Q8IX05 232 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 SIX5Q8N196 739 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 KIAA0895Q8NCT3 520 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 LNX1Q8TBB1 728 aaPredicted RBP13.86□□□□□ -0.19
CCDC57-211ENST00000578187 ZNF707Q96C28 371 aaPredicted RBP13.86□□□□□ -0.19
CCDC57-211ENST00000578187 TSPAN18Q96SJ8 248 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 RTP3Q9BQQ7 232 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 CBWD1Q9BRT8 395 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 GOLGA2P5Q9HBQ8 144 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 SLC39A2Q9NP94 309 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 POLIQ9UNA4 740 aa13.86□□□□□ -0.19
CCDC57-211ENST00000578187 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
CCDC57-211ENST00000578187 LACTBL1A8MY62 500 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 H0Y858 1186 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 KIAA0391O15091 583 aaKnown RBP13.85□□□□□ -0.19
CCDC57-211ENST00000578187 TGFB1I1O43294 461 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 RHOBTB3O94955 611 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 RPN1P04843 607 aaKnown RBP13.85□□□□□ -0.19
CCDC57-211ENST00000578187 C8AP07357 584 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 FSHRP23945 695 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 SNRPFP62306 86 aaKnown RBP13.85□□□□□ -0.19
CCDC57-211ENST00000578187 STK4Q13043 487 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 UVSSAQ2YD98 709 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 ARMCX5Q6P1M9 558 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 CD300LGQ6UXG3 332 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 ANKS3Q6ZW76 656 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 RTL10Q7L3V2 364 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 TMEM105Q8N8V8 129 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 C3orf58Q8NDZ4 430 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 FEZF2Q8TBJ5 459 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 C18orf25Q96B23 403 aaPredicted RBP13.85□□□□□ -0.19
CCDC57-211ENST00000578187 CCDC34Q96HJ3 373 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 TIGD1Q96MW7 591 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 CLSTN3Q9BQT9 956 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 WNT16Q9UBV4 365 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 TUBGCP4Q9UGJ1 667 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 DERAQ9Y315 318 aa13.85□□□□□ -0.19
CCDC57-211ENST00000578187 PODXLO00592 558 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 EXTL3O43909 919 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 N4BP1O75113 896 aaKnown RBP13.84□□□□□ -0.19
CCDC57-211ENST00000578187 GADD45BO75293 160 aaPredicted RBP13.84□□□□□ -0.19
CCDC57-211ENST00000578187 LDHAP00338 332 aaKnown RBP13.84□□□□□ -0.19
CCDC57-211ENST00000578187 CFHP08603 1231 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 SRFP11831 508 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 LAMP2P13473 410 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 AOC1P19801 751 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 CYP3A5P20815 502 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 FGFR3P22607 806 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 LRPAP1P30533 357 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 RPL9P32969 192 aaKnown RBP13.84□□□□□ -0.19
CCDC57-211ENST00000578187 OR1D2P34982 312 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 SPAG1Q07617 926 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 KCNB1Q14721 858 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 MTSS1LQ765P7 747 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 GRASPQ7Z6J2 395 aaPredicted RBP13.84□□□□□ -0.19
CCDC57-211ENST00000578187 BRSK2Q8IWQ3 736 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 ZSWIM2Q8NEG5 633 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 SLC7A14Q8TBB6 771 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 SAAL1Q96ER3 474 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 KIF12Q96FN5 646 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
CCDC57-211ENST00000578187 MYADMQ96S97 322 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 FAM213AQ9BRX8 229 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 ASB7Q9H672 318 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 AGPAT3Q9NRZ7 376 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 FAM86C1Q9NVL1 165 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 MTRRQ9UBK8 725 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 UBQLN1Q9UMX0 589 aaKnown RBP13.84□□□□□ -0.19
CCDC57-211ENST00000578187 C2CD2Q9Y426 696 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 NUB1Q9Y5A7 615 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 SCN1AP35498 2009 aa13.84□□□□□ -0.19
CCDC57-211ENST00000578187 XPOTO43592 962 aaKnown RBP13.83□□□□□ -0.2
CCDC57-211ENST00000578187 GFRA3O60609 400 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 IL18RAPO95256 599 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 NFICP08651 508 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 IGFBP6P24592 240 aaPredicted RBP13.83□□□□□ -0.2
CCDC57-211ENST00000578187 ELF1P32519 619 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 RAB33AQ14088 237 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 KNOP1Q1ED39 458 aaKnown RBP13.83□□□□□ -0.2
CCDC57-211ENST00000578187 SPATA1Q5VX52 437 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 JADE1Q6IE81 842 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 CLEC17AQ6ZS10 378 aa13.83□□□□□ -0.2
CCDC57-211ENST00000578187 NELFCDQ8IXH7 590 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms