RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 RALGPS2Q86X27 583 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 SYT2Q8N9I0 419 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 FAM184AQ8NB25 1140 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 CSGALNACT1Q8TDX6 532 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 ING5Q8WYH8 240 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 CXCL16Q9H2A7 254 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 HEBP1Q9NRV9 189 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 TRIP11Q15643 1979 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 CCDC163A0A0D9SF12 145 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 MED19A0JLT2 244 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 LRRN2O75325 713 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 MOSPD3O75425 235 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 SEC24AO95486 1093 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 EPHB3P54753 998 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 GPR17Q13304 367 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 ZBTB6Q15916 424 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 VITQ6UXI7 678 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 HAUS6Q7Z4H7 955 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 YAF2Q8IY57 180 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 EXOC4Q96A65 974 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 LOXL4Q96JB6 756 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 ZMAT2Q96NC0 199 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 TBC1D32Q96NH3 1257 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 TCHPQ9BT92 498 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 KIFC3Q9BVG8 833 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 TARS2Q9BW92 718 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 DSEQ9UL01 958 aa12.25□□□□□ -0.45
SMARCE1-214ENST00000578112 ARNTLO00327 626 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 AKAP3O75969 853 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 MAPTP10636 758 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 CDC25AP30304 524 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 LIMK1P53667 647 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 NCKAP1LP55160 1127 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 YWHAHQ04917 246 aaPredicted RBP12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 TWF1Q12792 350 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 MTAPQ13126 283 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 ECM1Q16610 540 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 ARHGAP15Q53QZ3 475 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 RILPL1Q5EBL4 403 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 ARL6IP4Q66PJ3 421 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 LONP2Q86WA8 852 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 AK8Q96MA6 479 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 LARSQ9P2J5 1176 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 YIPF1Q9Y548 306 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 PIAS3Q9Y6X2 628 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 FAM186AA6NE01 2351 aa12.24□□□□□ -0.45
SMARCE1-214ENST00000578112 A0A087WWV3 80 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 SLC30A4O14863 429 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 DDX6P26196 483 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 CXCL12P48061 93 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 ATXN1P54253 815 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 PPP2R3AQ06190 1150 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 SLC10A6Q3KNW5 377 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 TMEM161BQ8NDZ6 487 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 LRRC3Q9BY71 257 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 GOLGA2P5Q9HBQ8 144 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 TICRRQ7Z2Z1 1910 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 TTC26A0AVF1 554 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 MYBPHLA2RUH7 354 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 CLDN3O15551 220 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 CHRNB1P11230 501 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 CPB1P15086 417 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 TGM1P22735 817 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 GDI1P31150 447 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 USP37Q86T82 979 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 WDR5BQ86VZ2 330 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 TMC8Q8IU68 726 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 LMAN1LQ9HAT1 526 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 CEP72Q9P209 647 aa12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 BCCIPQ9P287 314 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMARCE1-214ENST00000578112 CYP11A1P05108 521 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 ODC1P11926 461 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 ALDH1A3P47895 512 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 TUFMP49411 452 aaKnown RBP12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 ATP2C1P98194 919 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 CSRP2Q16527 193 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 NT5DC4Q86YG4 428 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 CEP120Q8N960 986 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 ZSCAN18Q8TBC5 510 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 SPATA18Q8TC71 538 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 PSMG2Q969U7 264 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 RUSC1Q9BVN2 902 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 KIF9Q9HAQ2 790 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 TSC2P49815 1807 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 HEPACAM2A8MVW5 462 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 E9PMD0 336 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 I3L4J1 428 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 BMP15O95972 392 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 CDC25CP30307 473 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 TMEM119Q4V9L6 283 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 CCDC83Q8IWF9 413 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 DCLK2Q8N568 766 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 SHKBP1Q8TBC3 707 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 TCEAL4Q96EI5 215 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 CCSER1Q9C0I3 900 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 PPP4R2Q9NY27 417 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 MYH11P35749 1972 aa12.22□□□□□ -0.45
SMARCE1-214ENST00000578112 SLC16A4O15374 487 aa12.21□□□□□ -0.45
SMARCE1-214ENST00000578112 MYL4P12829 197 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms