RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 SOCS7O14512 581 aa8.8□□□□□ -1
SKA2-203ENST00000578105 WIPF1O43516 503 aa8.8□□□□□ -1
SKA2-203ENST00000578105 PPFIA2O75334 1257 aa8.8□□□□□ -1
SKA2-203ENST00000578105 PROSCO94903 275 aa8.8□□□□□ -1
SKA2-203ENST00000578105 VNN1O95497 513 aa8.8□□□□□ -1
SKA2-203ENST00000578105 GH1P01241 217 aa8.8□□□□□ -1
SKA2-203ENST00000578105 TNNC2P02585 160 aa8.8□□□□□ -1
SKA2-203ENST00000578105 NUDT17P0C025 328 aa8.8□□□□□ -1
SKA2-203ENST00000578105 MYZAPP0CAP1 466 aa8.8□□□□□ -1
SKA2-203ENST00000578105 MCF2P10911 925 aa8.8□□□□□ -1
SKA2-203ENST00000578105 CETPP11597 493 aa8.8□□□□□ -1
SKA2-203ENST00000578105 P4HA1P13674 534 aa8.8□□□□□ -1
SKA2-203ENST00000578105 ECHS1P30084 290 aa8.8□□□□□ -1
SKA2-203ENST00000578105 GNA15P30679 374 aa8.8□□□□□ -1
SKA2-203ENST00000578105 POLR2BP30876 1174 aaKnown RBP8.8□□□□□ -1
SKA2-203ENST00000578105 EPHX2P34913 555 aa8.8□□□□□ -1
SKA2-203ENST00000578105 PHKA2P46019 1235 aa8.8□□□□□ -1
SKA2-203ENST00000578105 GSCP56915 257 aaPredicted RBP8.8□□□□□ -1
SKA2-203ENST00000578105 NOMO3P69849 1222 aa8.8□□□□□ -1
SKA2-203ENST00000578105 TRPC3Q13507 836 aa8.8□□□□□ -1
SKA2-203ENST00000578105 MOGSQ13724 837 aa8.8□□□□□ -1
SKA2-203ENST00000578105 PLCB4Q15147 1175 aa8.8□□□□□ -1
SKA2-203ENST00000578105 ZSCAN26Q16670 478 aa8.8□□□□□ -1
SKA2-203ENST00000578105 GPAT2Q6NUI2 795 aa8.8□□□□□ -1
SKA2-203ENST00000578105 TRMT1LQ7Z2T5 733 aaKnown RBP8.8□□□□□ -1
SKA2-203ENST00000578105 JAMLQ86YT9 394 aa8.8□□□□□ -1
SKA2-203ENST00000578105 RHOT1Q8IXI2 618 aa8.8□□□□□ -1
SKA2-203ENST00000578105 GSPT2Q8IYD1 628 aaKnown RBP8.8□□□□□ -1
SKA2-203ENST00000578105 RBBP8NLQ8NC74 664 aaPredicted RBP8.8□□□□□ -1
SKA2-203ENST00000578105 TSEN2Q8NCE0 465 aaKnown RBP8.8□□□□□ -1
SKA2-203ENST00000578105 TMEM35BQ8NCS4 154 aa8.8□□□□□ -1
SKA2-203ENST00000578105 MAGOHBQ96A72 148 aaKnown RBP8.8□□□□□ -1
SKA2-203ENST00000578105 OPTNQ96CV9 577 aa8.8□□□□□ -1
SKA2-203ENST00000578105 ATP6V1G3Q96LB4 118 aa8.8□□□□□ -1
SKA2-203ENST00000578105 SPATA33Q96N06 139 aa8.8□□□□□ -1
SKA2-203ENST00000578105 TSPAN18Q96SJ8 248 aa8.8□□□□□ -1
SKA2-203ENST00000578105 POP1Q99575 1024 aaKnown RBP8.8□□□□□ -1
SKA2-203ENST00000578105 PAGR1Q9BTK6 254 aa8.8□□□□□ -1
SKA2-203ENST00000578105 TMEM109Q9BVC6 243 aa8.8□□□□□ -1
SKA2-203ENST00000578105 AP1M1Q9BXS5 423 aa8.8□□□□□ -1
SKA2-203ENST00000578105 CAPS2Q9BXY5 557 aa8.8□□□□□ -1
SKA2-203ENST00000578105 FRMD8P1Q9BZ68 369 aaPredicted RBP8.8□□□□□ -1
SKA2-203ENST00000578105 NIF3L1Q9GZT8 377 aa8.8□□□□□ -1
SKA2-203ENST00000578105 VRTNQ9H8Y1 702 aa8.8□□□□□ -1
SKA2-203ENST00000578105 TOPORSQ9NS56 1045 aaPredicted RBP8.8□□□□□ -1
SKA2-203ENST00000578105 WDR35Q9P2L0 1181 aa8.8□□□□□ -1
SKA2-203ENST00000578105 MORF4L1Q9UBU8 362 aa8.8□□□□□ -1
SKA2-203ENST00000578105 IP6K2Q9UHH9 426 aa8.8□□□□□ -1
SKA2-203ENST00000578105 ANAPC7Q9UJX3 599 aa8.8□□□□□ -1
SKA2-203ENST00000578105 PCDHB4Q9Y5E5 795 aa8.8□□□□□ -1
SKA2-203ENST00000578105 TTI1O43156 1089 aa8.79□□□□□ -1
SKA2-203ENST00000578105 FAM189A1O60320 539 aa8.79□□□□□ -1
SKA2-203ENST00000578105 PPFIA4O75335 1185 aa8.79□□□□□ -1
SKA2-203ENST00000578105 ECEL1O95672 775 aa8.79□□□□□ -1
SKA2-203ENST00000578105 STAU1O95793 577 aaKnown RBP8.79□□□□□ -1
SKA2-203ENST00000578105 GAS8O95995 478 aa8.79□□□□□ -1
SKA2-203ENST00000578105 PAEPP09466 180 aa8.79□□□□□ -1
SKA2-203ENST00000578105 TMEM191BP0C7N4 346 aa8.79□□□□□ -1
SKA2-203ENST00000578105 TXNP10599 105 aaKnown RBP8.79□□□□□ -1
SKA2-203ENST00000578105 ITIH2P19823 946 aa8.79□□□□□ -1
SKA2-203ENST00000578105 PTPN7P35236 360 aa8.79□□□□□ -1
SKA2-203ENST00000578105 HSD17B3P37058 310 aa8.79□□□□□ -1
SKA2-203ENST00000578105 COILP38432 576 aaPredicted RBP8.79□□□□□ -1
SKA2-203ENST00000578105 ACOT2P49753 483 aa8.79□□□□□ -1
SKA2-203ENST00000578105 GTF2A2P52657 109 aa8.79□□□□□ -1
SKA2-203ENST00000578105 SOX10P56693 466 aa8.79□□□□□ -1
SKA2-203ENST00000578105 RNASE9P60153 205 aaKnown RBP8.79□□□□□ -1
SKA2-203ENST00000578105 PRKG1Q13976 671 aa8.79□□□□□ -1
SKA2-203ENST00000578105 TTLL12Q14166 644 aaPredicted RBP8.79□□□□□ -1
SKA2-203ENST00000578105 PIGHQ14442 188 aaPredicted RBP8.79□□□□□ -1
SKA2-203ENST00000578105 ACAP1Q15027 740 aa8.79□□□□□ -1
SKA2-203ENST00000578105 LY6KQ17RY6 165 aa8.79□□□□□ -1
SKA2-203ENST00000578105 ATF7IP2Q5U623 682 aa8.79□□□□□ -1
SKA2-203ENST00000578105 CCDC137Q6PK04 289 aaKnown RBP8.79□□□□□ -1
SKA2-203ENST00000578105 MAMDC4Q6UXC1 1216 aa8.79□□□□□ -1
SKA2-203ENST00000578105 TMC3Q7Z5M5 1100 aa8.79□□□□□ -1
SKA2-203ENST00000578105 ANKRD23Q86SG2 305 aa8.79□□□□□ -1
SKA2-203ENST00000578105 KATNAL2Q8IYT4 538 aa8.79□□□□□ -1
SKA2-203ENST00000578105 PRELID2Q8N945 189 aa8.79□□□□□ -1
SKA2-203ENST00000578105 RNF149Q8NC42 400 aa8.79□□□□□ -1
SKA2-203ENST00000578105 GPRC5AQ8NFJ5 357 aa8.79□□□□□ -1
SKA2-203ENST00000578105 EXD1Q8NHP7 514 aa8.79□□□□□ -1
SKA2-203ENST00000578105 PPTC7Q8NI37 304 aa8.79□□□□□ -1
SKA2-203ENST00000578105 ZNF526Q8TF50 670 aaPredicted RBP8.79□□□□□ -1
SKA2-203ENST00000578105 ALG3Q92685 438 aa8.79□□□□□ -1
SKA2-203ENST00000578105 UPF1Q92900 1129 aaKnown RBP eCLIP8.79□□□□□ -1
SKA2-203ENST00000578105 RBM41Q96IZ5 413 aaKnown RBP8.79□□□□□ -1
SKA2-203ENST00000578105 FGD4Q96M96 766 aa8.79□□□□□ -1
SKA2-203ENST00000578105 TCHPQ9BT92 498 aa8.79□□□□□ -1
SKA2-203ENST00000578105 TXLNGYQ9BZA5 131 aa8.79□□□□□ -1
SKA2-203ENST00000578105 LHX5Q9H2C1 402 aa8.79□□□□□ -1
SKA2-203ENST00000578105 GOLPH3Q9H4A6 298 aa8.79□□□□□ -1
SKA2-203ENST00000578105 CNOT10Q9H9A5 744 aaKnown RBP8.79□□□□□ -1
SKA2-203ENST00000578105 CYP3A43Q9HB55 503 aa8.79□□□□□ -1
SKA2-203ENST00000578105 TMBIM4Q9HC24 238 aa8.79□□□□□ -1
SKA2-203ENST00000578105 PTPRHQ9HD43 1115 aa8.79□□□□□ -1
SKA2-203ENST00000578105 WBP1LQ9NX94 342 aa8.79□□□□□ -1
SKA2-203ENST00000578105 SLC5A4Q9NY91 659 aa8.79□□□□□ -1
SKA2-203ENST00000578105 ADAM22Q9P0K1 906 aa8.79□□□□□ -1
SKA2-203ENST00000578105 WHRNQ9P202 907 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms