RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 SENP8Q96LD8 212 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 DZANK1Q9NVP4 752 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 MTRRQ9UBK8 725 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 FAM50BQ9Y247 325 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 HCFC2Q9Y5Z7 792 aa14.99□□□□□ -0.01
SNORD3B-1-201ENST00000577988 KPNA7A9QM74 516 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TULP1O00294 542 aaPredicted RBP14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 BIN1O00499 593 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 GLUD1P00367 558 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ITGB3P05106 788 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CYP11A1P05108 521 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 FAM163BP0C2L3 166 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 EPB41P11171 864 aaKnown RBP14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ODC1P11926 461 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PTMSP20962 102 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 BMP6P22004 513 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 IGFBP6P24592 240 aaPredicted RBP14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 GTF2F1P35269 517 aaKnown RBP eCLIP14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CLCN4P51793 760 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 MYO1EQ12965 1108 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 RAB33AQ14088 237 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CT47A1Q5JQC4 288 aaPredicted RBP14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 VARS2Q5ST30 1063 aaKnown RBP14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ISM2Q6H9L7 571 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PRSS55Q6UWB4 352 aaPredicted RBP14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 EP400NLQ6ZTU2 488 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TRAPPC11Q7Z392 1133 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 FAM186BQ8IYM0 893 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 OR5B17Q8NGF7 314 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CXorf38Q8TB03 319 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 GPT2Q8TD30 523 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CEP63Q96MT8 703 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CLSTN3Q9BQT9 956 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 MTMR12Q9C0I1 747 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PLEKHA4Q9H4M7 779 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 GDAP2Q9NXN4 497 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 AGAP1Q9UPQ3 857 aa14.98□□□□□ -0.01
SNORD3B-1-201ENST00000577988 I3L4J1 428 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PPEF2O14830 753 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 SLC16A3O15427 465 aaKnown RBP14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TBC1D4O60343 1298 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 AKAP3O75969 853 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 FGFR1OPO95684 399 aaKnown RBP14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 STAU1O95793 577 aaKnown RBP14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 GLP2RO95838 553 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 KRT19P08727 400 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CD44P16070 742 aaKnown RBP14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 KCNA5P22460 613 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 POLR2BP30876 1174 aaKnown RBP14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ATICP31939 592 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 GTF2H1P32780 548 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 VAMP7P51809 220 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 YWHAHQ04917 246 aaPredicted RBP14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 SLC8B1Q6J4K2 584 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ZNF280DQ6N043 979 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ANKRD54Q6NXT1 300 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 LILRA6Q6PI73 481 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CYP26C1Q6V0L0 522 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 DPH6Q7L8W6 267 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 FILIP1Q7Z7B0 1213 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 METTL23Q86XA0 190 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.97□□□□□ -0.014e-58■■■■■ 510.1
SNORD3B-1-201ENST00000577988 NELFBQ8WX92 580 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 BORCS6Q96GS4 357 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 MSLNLQ96KJ4 702 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 B3GALT6Q96L58 329 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 METTL14Q9HCE5 456 aaKnown RBP14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CLEC1BQ9P126 229 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 SIX4Q9UIU6 781 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CD207Q9UJ71 328 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 MAFFQ9ULX9 164 aa14.97□□□□□ -0.01
SNORD3B-1-201ENST00000577988 OR6C75A6NL08 312 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 LRRIQ3A6PVS8 624 aaPredicted RBP14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CYB561D2O14569 222 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 SPTLC1O15269 473 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 LINC01565O15544 149 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 STX10O60499 249 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TBX10O75333 385 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 C4BPAP04003 597 aaKnown RBP14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 BFSP1Q12934 665 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PAK1Q13153 545 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TRPC3Q13507 836 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 CTXN3Q4LDR2 81 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TTI2Q6NXR4 508 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 RBM43Q6ZSC3 357 aaKnown RBP14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 TMEM86AQ8N2M4 240 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 VN1R2Q8NFZ6 395 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ZNF516Q92618 1163 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 HPDLQ96IR7 371 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 ASB2Q96Q27 587 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 POP1Q99575 1024 aaKnown RBP14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 RHOBTB2Q9BYZ6 727 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 GZF1Q9H116 711 aaPredicted RBP14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PRDM6Q9NQX0 595 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 DACH1Q9UI36 760 aa14.96□□□□□ -0.01
SNORD3B-1-201ENST00000577988 PTPRJQ12913 1337 aa14.95□□□□□ -0.02
SNORD3B-1-201ENST00000577988 HUS1O60921 280 aa14.95□□□□□ -0.02
SNORD3B-1-201ENST00000577988 PHACTR2O75167 634 aa14.95□□□□□ -0.02
SNORD3B-1-201ENST00000577988 PAPLNO95428 1278 aa14.95□□□□□ -0.02
SNORD3B-1-201ENST00000577988 GNA14O95837 355 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms