RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ACAP1Q15027 740 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.03□□□□□ -0.481e-10■■■■■ 46
CDK5RAP3-204ENST00000577664 SV2AQ7L0J3 742 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 TMCO2Q7Z6W1 182 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 FAXDC2Q96IV6 333 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 SAMD11Q96NU1 681 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CASD1Q96PB1 797 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 FNBP1Q96RU3 617 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 C17orf80Q9BSJ5 609 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 TMEM117Q9H0C3 514 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 RC3H2Q9HBD1 1191 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 TMEM8AQ9HCN3 771 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 MIOSQ9NXC5 875 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ANK1P16157 1881 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ANKRD11Q6UB99 2663 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 MYO7AQ13402 2215 aa12.02□□□□□ -0.48
CDK5RAP3-204ENST00000577664 A0A1W2PQC6 194 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ANO9A1A5B4 782 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GOLGA6L3A6NEY3 463 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LGALS16A8MUM7 142 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 XPOTO43592 962 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 N4BP1O75113 896 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 STAU1O95793 577 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 AMHP03971 560 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 THP07101 528 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 HARSP12081 509 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PAX3P23760 479 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LRPAP1P30533 357 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 MTIF2P46199 727 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FMO5P49326 533 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 HTRA4P83105 476 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DLX2Q07687 328 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CLLU1OSQ5K130 101 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 KRT39Q6A163 491 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 JADE1Q6IE81 842 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 EFCAB13Q8IY85 973 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LMO3Q8TAP4 145 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 NAP1L5Q96NT1 182 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ERGIC2Q96RQ1 377 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GAD1Q99259 594 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CXCL16Q9H2A7 254 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 VRTNQ9H8Y1 702 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SLC38A7Q9NVC3 462 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PARP2Q9UGN5 583 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 UBQLN1Q9UMX0 589 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PIRO00625 290 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 AP5Z1O43299 807 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TPM2P07951 284 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TNNI1P19237 187 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 RPL9P32969 192 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PBX1P40424 430 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 AFF1P51825 1210 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 UBASH3AP57075 661 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DSC1Q08554 894 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GRIK3Q13003 919 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TMEM132DQ14C87 1099 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FILIP1LQ4L180 1135 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CBWD6Q4V339 395 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 HSP90AA4PQ58FG1 418 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 NOMO2Q5JPE7 1267 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CBWD3Q5JTY5 395 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CBWD5Q5RIA9 395 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DPY19L2P1Q6NXN4 242 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GLB1LQ6UWU2 654 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 EP400NLQ6ZTU2 488 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TRAPPC11Q7Z392 1133 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 OR5B17Q8NGF7 314 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LPPQ93052 612 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CCDC127Q96BQ5 260 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 RIPOR3Q96MK2 946 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ZFP42Q96MM3 310 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 GRPEL1Q9HAV7 217 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ITGA11Q9UKX5 1188 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PTPRJQ12913 1337 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TRIP11Q15643 1979 aa12.01□□□□□ -0.49
CDK5RAP3-204ENST00000577664 PDCD11Q14690 1871 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CARNS1A5YM72 827 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CBFA2T2O43439 604 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ZC3H11AO75152 810 aaKnown RBP eCLIP12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 SERPINC1P01008 464 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 CST3P01034 146 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 NFICP08651 508 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 FAM163BP0C2L3 166 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DLATP10515 647 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ATICP31939 592 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 MLH1P40692 756 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 KCNMA1Q12791 1236 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 EPC2Q52LR7 807 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TDRD10Q5VZ19 366 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 LRRC52Q8N7C0 313 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 C1orf127Q8N9H9 656 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 EHBP1Q8NDI1 1231 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 BEST2Q8NFU1 509 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 TAF4BQ92750 862 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 KIF12Q96FN5 646 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 DDX27Q96GQ7 796 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 MRFAP1L1Q96HT8 127 aa12□□□□□ -0.49
CDK5RAP3-204ENST00000577664 ANKRD36BP1Q96IX9 119 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms