RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 NBPF8Q3BBV2 869 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 FAM153CQ494X1 144 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 PXDC1Q5TGL8 231 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 EGFLAMQ63HQ2 1017 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 SLC2A7Q6PXP3 512 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 HAPLN3Q96S86 360 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 SH2D3AQ9BRG2 576 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 SLKQ9H2G2 1235 aaPredicted RBP3.51□□□□□ -1.85
TOP2A-202ENST00000577541 GPRC5DQ9NZD1 345 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 FAM30AQ9NZY2 134 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 USP25Q9UHP3 1055 aa3.51□□□□□ -1.85
TOP2A-202ENST00000577541 RPTORQ8N122 1335 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 TRGV11A0A075B6L2 103 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 GAS8-AS1O95177 125 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 MTHFD2P13995 350 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 FLT3LGP49771 235 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 LGALS4P56470 323 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 UGT8Q16880 541 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 MUM1Q2TAK8 710 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 CT83Q5H943 113 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 VWA1Q6PCB0 445 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 ABHD15Q6UXT9 468 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 TSPEARQ8WU66 669 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 ZNF480Q8WV37 535 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 HOXB13Q92826 284 aaPredicted RBP3.5□□□□□ -1.85
TOP2A-202ENST00000577541 EAF2Q96CJ1 260 aaPredicted RBP3.5□□□□□ -1.85
TOP2A-202ENST00000577541 FBXL20Q96IG2 436 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 ATRNL1Q5VV63 1379 aa3.5□□□□□ -1.85
TOP2A-202ENST00000577541 GPR39O43194 453 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 LPLP06858 475 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 CPEP16870 476 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 ERVK-21P61565 698 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 STRN3Q13033 797 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 STAT4Q14765 748 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 ADRM1Q16186 407 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 ZNF572Q7Z3I7 529 aaPredicted RBP3.49□□□□□ -1.85
TOP2A-202ENST00000577541 SPATS2Q86XZ4 545 aaKnown RBP3.49□□□□□ -1.85
TOP2A-202ENST00000577541 RASAL3Q86YV0 1011 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 AUTS2Q8WXX7 1259 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 BCO1Q9HAY6 547 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 USP35Q9P2H5 1018 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 ST3GAL5Q9UNP4 418 aa3.49□□□□□ -1.85
TOP2A-202ENST00000577541 TRIM75PA6NK02 468 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 PRAMEF4O60810 478 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 CYP2D6P10635 497 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 GCSHP23434 173 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 GUCY1A2P33402 732 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 GPR3P46089 330 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 MTNR1BP49286 362 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 THBS3P49746 956 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 SP140Q13342 867 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 GEN1Q17RS7 908 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 FAM47AQ5JRC9 791 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 CEP78Q5JTW2 689 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 PRAMEF14Q5SWL7 426 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 GPR156Q8NFN8 814 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 OR7D4Q8NG98 312 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 SSH1Q8WYL5 1049 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 FATE1Q969F0 183 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 GREM2Q9H772 168 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 ZNF277Q9NRM2 450 aaPredicted RBP3.48□□□□□ -1.85
TOP2A-202ENST00000577541 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.48□□□□□ -1.85
TOP2A-202ENST00000577541 PHLDB1Q86UU1 1377 aa3.48□□□□□ -1.85
TOP2A-202ENST00000577541 LINC00473A8K010 186 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 CXorf49A8MYA2 514 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-202ENST00000577541 GCOM1H8Y6P7 765 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-202ENST00000577541 PROM1O43490 865 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 PRKD3O94806 890 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 SNRPA1P09661 255 aaKnown RBP3.47□□□□□ -1.85
TOP2A-202ENST00000577541 SRGNP10124 158 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 ALOX15P16050 662 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-202ENST00000577541 PPP3CAQ08209 521 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 MGAT2Q10469 447 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 ERV3-1Q14264 604 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 RNF219Q5W0B1 726 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-202ENST00000577541 Q6ZVL8 140 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 TRMT2AQ8IZ69 625 aaKnown RBP3.47□□□□□ -1.85
TOP2A-202ENST00000577541 UBR7Q8N806 425 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 CTAGE1Q96RT6 745 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 IFT122Q9HBG6 1241 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 VTA1Q9NP79 307 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 RBM12Q9NTZ6 932 aaKnown RBP3.47□□□□□ -1.85
TOP2A-202ENST00000577541 SERGEFQ9UGK8 458 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 DPP7Q9UHL4 492 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 TTC3P53804 2025 aa3.47□□□□□ -1.85
TOP2A-202ENST00000577541 ADM5C9JUS6 153 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 ADCY6O43306 1168 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 CLSTN1O94985 981 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 TUBB4AP04350 444 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 WASP42768 502 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 RAP2BP61225 183 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 KRT85P78386 507 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 MALLQ13021 153 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 PTPRRQ15256 657 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 LRRC41Q15345 812 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 INAVAQ3KP66 663 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 OTUD7BQ6GQQ9 843 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 GSG1LQ6UXU4 331 aa3.46□□□□□ -1.86
TOP2A-202ENST00000577541 LHFPL2Q6ZUX7 228 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms