RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 WNT7BP56706 349 aa25.4■■□□□ 1.66
SNF8-217ENST00000576353 YWHAHQ04917 246 aaPredicted RBP25.4■■□□□ 1.66
SNF8-217ENST00000576353 SNW1Q13573 536 aaKnown RBP25.4■■□□□ 1.66
SNF8-217ENST00000576353 KCNB1Q14721 858 aa25.4■■□□□ 1.66
SNF8-217ENST00000576353 USP37Q86T82 979 aa25.4■■□□□ 1.66
SNF8-217ENST00000576353 ENGASEQ8NFI3 743 aa25.4■■□□□ 1.66
SNF8-217ENST00000576353 OXCT2Q9BYC2 517 aaPredicted RBP25.4■■□□□ 1.66
SNF8-217ENST00000576353 POMKQ9H5K3 350 aa25.4■■□□□ 1.66
SNF8-217ENST00000576353 CDH22Q9UJ99 828 aa25.4■■□□□ 1.66
SNF8-217ENST00000576353 NR2E1Q9Y466 385 aa25.4■■□□□ 1.66
SNF8-217ENST00000576353 PDCD11Q14690 1871 aaKnown RBP25.39■■□□□ 1.66
SNF8-217ENST00000576353 RFPL2O75678 378 aa25.39■■□□□ 1.66
SNF8-217ENST00000576353 OAZ2O95190 189 aa25.39■■□□□ 1.66
SNF8-217ENST00000576353 PAPLNO95428 1278 aa25.39■■□□□ 1.66
SNF8-217ENST00000576353 TYMPP19971 482 aa25.39■■□□□ 1.66
SNF8-217ENST00000576353 PNPLA4P41247 253 aa25.39■■□□□ 1.66
SNF8-217ENST00000576353 TAF6P49848 677 aa25.39■■□□□ 1.66
SNF8-217ENST00000576353 SNRNP35Q16560 246 aaKnown RBP25.39■■□□□ 1.66
SNF8-217ENST00000576353 ZNF461Q8TAF7 563 aa25.39■■□□□ 1.66
SNF8-217ENST00000576353 SENP8Q96LD8 212 aa25.39■■□□□ 1.66
SNF8-217ENST00000576353 TIGD1Q96MW7 591 aa25.39■■□□□ 1.66
SNF8-217ENST00000576353 HOOK1Q9UJC3 728 aaKnown RBP25.39■■□□□ 1.66
SNF8-217ENST00000576353 FBXL5Q9UKA1 691 aa25.39■■□□□ 1.66
SNF8-217ENST00000576353 SPTLC1O15269 473 aa25.38■■□□□ 1.65
SNF8-217ENST00000576353 HNRNPA1P09651 372 aaKnown RBP eCLIP25.38■■□□□ 1.65
SNF8-217ENST00000576353 TMEM191BP0C7N4 346 aa25.38■■□□□ 1.65
SNF8-217ENST00000576353 ODC1P11926 461 aa25.38■■□□□ 1.65
SNF8-217ENST00000576353 UVSSAQ2YD98 709 aa25.38■■□□□ 1.65
SNF8-217ENST00000576353 RTL10Q7L3V2 364 aa25.38■■□□□ 1.65
SNF8-217ENST00000576353 RDH13Q8NBN7 331 aa25.38■■□□□ 1.65
SNF8-217ENST00000576353 ZNF560Q96MR9 790 aa25.38■■□□□ 1.65
SNF8-217ENST00000576353 PRKD2Q9BZL6 878 aa25.38■■□□□ 1.65
SNF8-217ENST00000576353 ITGA11Q9UKX5 1188 aa25.38■■□□□ 1.65
SNF8-217ENST00000576353 TIMM13Q9Y5L4 95 aaPredicted RBP25.38■■□□□ 1.65
SNF8-217ENST00000576353 PDXKO00764 312 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 EXOC3O60645 756 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 ROR1Q01973 937 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 DUOXA2Q1HG44 320 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 SV2CQ496J9 727 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 PPM1LQ5SGD2 360 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 CCDC149Q6ZUS6 474 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 C1orf127Q8N9H9 656 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 SMG7Q92540 1137 aaKnown RBP25.37■■□□□ 1.65
SNF8-217ENST00000576353 ANKRD36BP1Q96IX9 119 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 KCTD10Q9H3F6 313 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 PIDD1Q9HB75 910 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 INTS13Q9NVM9 706 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 DSEQ9UL01 958 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 R3HCC1Q9Y3T6 440 aaKnown RBP25.37■■□□□ 1.65
SNF8-217ENST00000576353 BDP1A6H8Y1 2624 aa25.37■■□□□ 1.65
SNF8-217ENST00000576353 VWA8A3KMH1 1905 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 PRPF40AO75400 957 aaKnown RBP25.36■■□□□ 1.65
SNF8-217ENST00000576353 ABLIM3O94929 683 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 C8AP07357 584 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 HOXA9P31269 272 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 ELF1P32519 619 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 ARPP19P56211 112 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 RBP5P82980 135 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 TPGS2Q68CL5 300 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 OVOS1Q6IE37 1185 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 WDR49Q8IV35 697 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 SLC9A9Q8IVB4 645 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 CSGALNACT2Q8N6G5 542 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 TMEM174Q8WUU8 243 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 ZNF707Q96C28 371 aaPredicted RBP25.36■■□□□ 1.65
SNF8-217ENST00000576353 FNBP1Q96RU3 617 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 TSHZ2Q9NRE2 1034 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 RMND1Q9NWS8 449 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 AGAP1Q9UPQ3 857 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 USTQ9Y2C2 406 aa25.36■■□□□ 1.65
SNF8-217ENST00000576353 OR6C75A6NL08 312 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 KPNA7A9QM74 516 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 SMC2O95347 1197 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 TNNC2P02585 160 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 ITGB3P05106 788 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 POLR2BP30876 1174 aaKnown RBP25.35■■□□□ 1.65
SNF8-217ENST00000576353 PNOCQ13519 176 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 PSMD6Q15008 389 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 RNF135Q8IUD6 432 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 LRRC52Q8N7C0 313 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 SLC7A14Q8TBB6 771 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 MTMR12Q9C0I1 747 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 WDR6Q9NNW5 1121 aaKnown RBP25.35■■□□□ 1.65
SNF8-217ENST00000576353 MAFFQ9ULX9 164 aa25.35■■□□□ 1.65
SNF8-217ENST00000576353 WDR27A2RRH5 827 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 CYB561D2O14569 222 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 CALUO43852 315 aaPredicted RBP25.34■■□□□ 1.65
SNF8-217ENST00000576353 XYLBO75191 536 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 CYP11A1P05108 521 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 ALADP13716 330 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 ATF2P15336 505 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 CYP24A1Q07973 514 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 MYBPC2Q14324 1141 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 METTL23Q86XA0 190 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 GUF1Q8N442 669 aaKnown RBP25.34■■□□□ 1.65
SNF8-217ENST00000576353 FEZF2Q8TBJ5 459 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 MFSD14AQ96MC6 490 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 GSDMAQ96QA5 445 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 DMAC2Q9NW81 257 aa25.34■■□□□ 1.65
SNF8-217ENST00000576353 TRAF3IP3Q9Y228 551 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms