RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 URODP06132 367 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 TMEM191BP0C7N4 346 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 TNNI1P19237 187 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 KCNA5P22460 613 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 FGFR3P22607 806 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 CCNE1P24864 410 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 GCLMP48507 274 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 AARSP49588 968 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCDC40-215ENST00000576033 DSG1Q02413 1049 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 KRT17Q04695 432 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 UBE3AQ05086 875 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 PAK1Q13153 545 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 ADAM9Q13443 819 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 PTPROQ16827 1216 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 CBWD6Q4V339 395 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 COBLL1Q53SF7 1204 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 DCAF17Q5H9S7 520 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-215ENST00000576033 CBWD3Q5JTY5 395 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 CBWD5Q5RIA9 395 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 VARS2Q5ST30 1063 aaKnown RBP8.53□□□□□ -1.04
CCDC40-215ENST00000576033 DCLRE1AQ6PJP8 1040 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 SARM1Q6SZW1 724 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 FAM43BQ6ZT52 329 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-215ENST00000576033 LUZP1Q86V48 1076 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 PALB2Q86YC2 1186 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 WDR49Q8IV35 697 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 SLC9A9Q8IVB4 645 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 DHX40Q8IX18 779 aaKnown RBP8.53□□□□□ -1.04
CCDC40-215ENST00000576033 CSGALNACT2Q8N6G5 542 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 MRPL43Q8N983 215 aaKnown RBP8.53□□□□□ -1.04
CCDC40-215ENST00000576033 TRIML1Q8N9V2 468 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 STKLD1Q8NE28 680 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 OR10T2Q8NGX3 314 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 LNX1Q8TBB1 728 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-215ENST00000576033 PARD3BQ8TEW8 1205 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 BORCS6Q96GS4 357 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 SENP8Q96LD8 212 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 UROC1Q96N76 676 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 RTP3Q9BQQ7 232 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 CLSTN3Q9BQT9 956 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 PI4K2AQ9BTU6 479 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 LMAN2LQ9H0V9 348 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 ASB7Q9H672 318 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 SLC38A7Q9NVC3 462 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 CLEC1BQ9P126 229 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 HOOK1Q9UJC3 728 aaKnown RBP8.53□□□□□ -1.04
CCDC40-215ENST00000576033 NUB1Q9Y5A7 615 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 HCFC2Q9Y5Z7 792 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 PTPRDP23468 1912 aa8.52□□□□□ -1.04
CCDC40-215ENST00000576033 MTCL1Q9Y4B5 1905 aaKnown RBP8.52□□□□□ -1.04
CCDC40-215ENST00000576033 WDR27A2RRH5 827 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 NRG2O14511 850 aaPredicted RBP8.52□□□□□ -1.05
CCDC40-215ENST00000576033 PSMA7O14818 248 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 RFPL2O75678 378 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 SOAT2O75908 522 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 C4BPAP04003 597 aaKnown RBP8.52□□□□□ -1.05
CCDC40-215ENST00000576033 CYP3A5P20815 502 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 ACAT1P24752 427 aaKnown RBP8.52□□□□□ -1.05
CCDC40-215ENST00000576033 CLCN4P51793 760 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 ARPP19P56211 112 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 LILRA4P59901 499 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 MYL6P60660 151 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 ORC1Q13415 861 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 KCNC3Q14003 757 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 NCAPHQ15003 741 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 PSMD5Q16401 504 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 NFIL3Q16649 462 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 KYAT1Q16773 422 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 USP41Q3LFD5 358 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 DSTYKQ6XUX3 929 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 TRAPPC11Q7Z392 1133 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 TTC9BQ8N6N2 239 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 GOLGA5Q8TBA6 731 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 TAS1R2Q8TE23 839 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 ANP32BQ92688 251 aaKnown RBP8.52□□□□□ -1.05
CCDC40-215ENST00000576033 SEMA4DQ92854 862 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 CCDC34Q96HJ3 373 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 ANKRD36BP1Q96IX9 119 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 SUSD3Q96L08 255 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 PGLYRP2Q96PD5 576 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 FNBP1Q96RU3 617 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 TTPALQ9BTX7 342 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 SDCBP2Q9H190 292 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 XYLT2Q9H1B5 865 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 CRISPLD1Q9H336 500 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 SMYD3Q9H7B4 428 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 TLE6Q9H808 572 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 UBE2ZQ9H832 354 aaPredicted RBP8.52□□□□□ -1.05
CCDC40-215ENST00000576033 APOBEC3GQ9HC16 384 aaKnown RBP8.52□□□□□ -1.05
CCDC40-215ENST00000576033 HMGXB4Q9UGU5 601 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 PUF60Q9UHX1 559 aaKnown RBP8.52□□□□□ -1.05
CCDC40-215ENST00000576033 L1RE1Q9UN81 338 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 DERAQ9Y315 318 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 CDY1Q9Y6F8 540 aa8.52□□□□□ -1.05
CCDC40-215ENST00000576033 GRXCR2A6NFK2 248 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 M0QZQ0 153 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 CYB561D2O14569 222 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 IKBKBO14920 756 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 TGM5O43548 720 aa8.51□□□□□ -1.05
CCDC40-215ENST00000576033 CLSTN1O94985 981 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms