RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	CXCL14	O95715	111 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	C4BPA	P04003	597 aa	Known RBP	11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TMEM191B	P0C7N4	346 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TNNI1	P19237	187 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PTMS	P20962	102 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PAX3	P23760	479 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TKT	P29401	623 aa	Known RBP	11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	POLR2B	P30876	1174 aa	Known RBP	11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	GLUD2	P49448	558 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	VAMP7	P51809	220 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	HYAL1	Q12794	435 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	BFSP1	Q12934	665 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	KCNC3	Q14003	757 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	MRPL58	Q14197	206 aa	Known RBP	11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	DUSP6	Q16828	381 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	LEXM	Q3ZCV2	418 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TDRD10	Q5VZ19	366 aa	Known RBP	11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CAVIN1	Q6NZI2	390 aa	Known RBP	11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	FILIP1	Q7Z7B0	1213 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	GJD3	Q8N144	294 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	LRRC52	Q8N7C0	313 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	LNX1	Q8TBB1	728 aa	Predicted RBP	11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PIK3R5	Q8WYR1	880 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	ANKRD36BP1	Q96IX9	119 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	FNBP1	Q96RU3	617 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TTPAL	Q9BTX7	342 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	AGAP1	Q9UPQ3	857 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	HCN4	Q9Y3Q4	1203 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	NUB1	Q9Y5A7	615 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	NCOR1	O75376	2440 aa		11.69	□□□□□ -0.54
SLC12A4-215	ENST00000575857	BRWD1	Q9NSI6	2320 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	IKBKB	O14920	756 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TRAPPC3	O43617	180 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TBC1D4	O60343	1298 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	VNN1	O95497	513 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CST3	P01034	146 aa	Predicted RBP	11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TNNC2	P02585	160 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	UROD	P06132	367 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CNP	P09543	421 aa	Known RBP	11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TRIM49	P0CI25	452 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TRIM49C	P0CI26	452 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	EPB41	P11171	864 aa	Known RBP	11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	ERCC5	P28715	1186 aa	Predicted RBP	11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SSTR3	P32745	418 aa	Predicted RBP	11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TAF6	P49848	677 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	AP3M2	P53677	418 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	RBP5	P82980	135 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PPP3CA	Q08209	521 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CTC1	Q2NKJ3	1217 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	ZACN	Q401N2	412 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	EP400NL	Q6ZTU2	488 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SV2A	Q7L0J3	742 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	IRF2BP1	Q8IU81	584 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CSGALNACT2	Q8N6G5	542 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	MICAL1	Q8TDZ2	1067 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SENP8	Q96LD8	212 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	KLHL5	Q96PQ7	755 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	MRPL17	Q9NRX2	175 aa	Known RBP	11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PCDHB8	Q9UN66	801 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	VWA8	A3KMH1	1905 aa		11.68	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SCN1A	P35498	2009 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	C2CD2L	O14523	706 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PER2	O15055	1255 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TEX28	O15482	410 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CLASP2	O75122	1294 aa	Known RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	STAU1	O95793	577 aa	Known RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CYP11A1	P05108	521 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	KRT13	P13646	458 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PNPLA4	P41247	253 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	NRIP1	P48552	1158 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	MARS	P56192	900 aa	Known RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	NFKBIB	Q15653	356 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	VARS2	Q5ST30	1063 aa	Known RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	LIMS2	Q7Z4I7	341 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	FRMD5	Q7Z6J6	570 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	VN1R2	Q8NFZ6	395 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SLC22A17	Q8WUG5	538 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	RIN2	Q8WYP3	895 aa	Predicted RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SLC35C1	Q96A29	364 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CDCA3	Q99618	268 aa	Predicted RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	CLSTN3	Q9BQT9	956 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	FUCA2	Q9BTY2	467 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SRRT	Q9BXP5	876 aa	Known RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	XYLT2	Q9H1B5	865 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	TLE6	Q9H808	572 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	GDAP2	Q9NXN4	497 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	FNIP2	Q9P278	1114 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	MTRR	Q9UBK8	725 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	DACH1	Q9UI36	760 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	SSX2IP	Q9Y2D8	614 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	BACE2	Q9Y5Z0	518 aa		11.67	□□□□□ -0.54
SLC12A4-215	ENST00000575857	GRXCR2	A6NFK2	248 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms