RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SPOCK2Q92563 424 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 SYAP1Q96A49 352 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-216ENST00000575599 MARVELD3Q96A59 401 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 FAM84AQ96KN4 292 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 POP1Q99575 1024 aaKnown RBP14.34□□□□□ -0.11
RPAIN-216ENST00000575599 PDE11AQ9HCR9 933 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 CD320Q9NPF0 282 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 DPP3Q9NY33 737 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 DPP7Q9UHL4 492 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 RFPL2O75678 378 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 ARPP19P56211 112 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 FAM160A1Q05DH4 1040 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 LMBRD2Q68DH5 695 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-216ENST00000575599 RSPO2Q6UXX9 243 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-216ENST00000575599 NT5DC4Q86YG4 428 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 RDH13Q8NBN7 331 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 KREMEN2Q8NCW0 462 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 APPL2Q8NEU8 664 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 RPGRIP1Q96KN7 1286 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 RIPOR3Q96MK2 946 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 PHF7Q9BWX1 381 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-216ENST00000575599 POMKQ9H5K3 350 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 PCDHB8Q9UN66 801 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 TIMM13Q9Y5L4 95 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-216ENST00000575599 BACE2Q9Y5Z0 518 aa14.34□□□□□ -0.11
RPAIN-216ENST00000575599 ZNF233A6NK53 670 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 H7C4K7 107 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 PIRO00625 290 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 MTHFRP42898 656 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 LILRA4P59901 499 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 SNRPFP62306 86 aaKnown RBP14.33□□□□□ -0.12
RPAIN-216ENST00000575599 PNOCQ13519 176 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 SNW1Q13573 536 aaKnown RBP14.33□□□□□ -0.12
RPAIN-216ENST00000575599 SNRNP35Q16560 246 aaKnown RBP14.33□□□□□ -0.12
RPAIN-216ENST00000575599 CTXN3Q4LDR2 81 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 ATAT1Q5SQI0 421 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 LIN9Q5TKA1 542 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 ZNF280DQ6N043 979 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 LILRA6Q6PI73 481 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 CACTINQ8WUQ7 758 aaKnown RBP14.33□□□□□ -0.12
RPAIN-216ENST00000575599 NECTIN4Q96NY8 510 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 MTMR12Q9C0I1 747 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 PLEKHA4Q9H4M7 779 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 KIAA1586Q9HCI6 787 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 FBXW11Q9UKB1 542 aa14.33□□□□□ -0.12
RPAIN-216ENST00000575599 TTC28Q96AY4 2481 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 C2orf16Q68DN1 1984 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 CCDC195A0A1B0GUA6 201 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 ANO9A1A5B4 782 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 M0QZQ0 153 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 SPTLC1O15269 473 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 KINO60870 393 aaKnown RBP14.32□□□□□ -0.12
RPAIN-216ENST00000575599 RHOBTB3O94955 611 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 ITGB3P05106 788 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 TMEM191BP0C7N4 346 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 POLR2BP30876 1174 aaKnown RBP14.32□□□□□ -0.12
RPAIN-216ENST00000575599 AARSP49588 968 aaKnown RBP eCLIP14.32□□□□□ -0.12
RPAIN-216ENST00000575599 TAF6P49848 677 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 ROR1Q01973 937 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 YWHAHQ04917 246 aaPredicted RBP14.32□□□□□ -0.12
RPAIN-216ENST00000575599 RAB33AQ14088 237 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 KLHL40Q2TBA0 621 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 GPR149Q86SP6 731 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 USP37Q86T82 979 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 XXYLT1Q8NBI6 393 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 ENGASEQ8NFI3 743 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 HDAC7Q8WUI4 952 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 SENP8Q96LD8 212 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 CGNQ9P2M7 1197 aaKnown RBP14.32□□□□□ -0.12
RPAIN-216ENST00000575599 FBXL5Q9UKA1 691 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 MAPK8IP1Q9UQF2 711 aa14.32□□□□□ -0.12
RPAIN-216ENST00000575599 MTCL1Q9Y4B5 1905 aaKnown RBP14.32□□□□□ -0.12
RPAIN-216ENST00000575599 SCN1AP35498 2009 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 EXOC3O60645 756 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 C1RP00736 705 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 C8AP07357 584 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 KRT19P08727 400 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 DLATP10515 647 aaKnown RBP14.31□□□□□ -0.12
RPAIN-216ENST00000575599 ODC1P11926 461 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 MRPL58Q14197 206 aaKnown RBP14.31□□□□□ -0.12
RPAIN-216ENST00000575599 KCNB1Q14721 858 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 SURF1Q15526 300 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 SLC8B1Q6J4K2 584 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 C15orf39Q6ZRI6 1047 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 C12orf56Q8IXR9 622 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 C1orf127Q8N9H9 656 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 CMASQ8NFW8 434 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-216ENST00000575599 GOLGA5Q8TBA6 731 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 SLC7A14Q8TBB6 771 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 GPT2Q8TD30 523 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 SMG7Q92540 1137 aaKnown RBP14.31□□□□□ -0.12
RPAIN-216ENST00000575599 ERCC4Q92889 916 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-216ENST00000575599 CCDC127Q96BQ5 260 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 ANKRD36BP1Q96IX9 119 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 ZNF560Q96MR9 790 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 PIDD1Q9HB75 910 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 AGAP1Q9UPQ3 857 aa14.31□□□□□ -0.12
RPAIN-216ENST00000575599 TSC2P49815 1807 aa14.3□□□□□ -0.12
RPAIN-216ENST00000575599 PTPRJQ12913 1337 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms