RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 ACTR2P61160 394 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 BNIP1Q12981 228 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 RFX8Q6ZV50 586 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 C4orf33Q8N1A6 199 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 NSUN6Q8TEA1 469 aaKnown RBP9.04□□□□□ -0.96
RPAIN-215ENST00000575112 COPS5Q92905 334 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 AGO4Q9HCK5 861 aaKnown RBP9.04□□□□□ -0.96
RPAIN-215ENST00000575112 SLC9A2Q9UBY0 812 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 GRID1Q9ULK0 1009 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 TAF1LQ8IZX4 1826 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 CDK5RAP2Q96SN8 1893 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 BTNL10A8MVZ5 291 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 GGPS1O95749 300 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 PSAPP07602 524 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 VIL1P09327 827 aaKnown RBP9.04□□□□□ -0.96
RPAIN-215ENST00000575112 CYP11B1P15538 503 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 GCLCP48506 637 aaPredicted RBP9.04□□□□□ -0.96
RPAIN-215ENST00000575112 DNAJC3Q13217 504 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 PGM5Q15124 567 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 BBS9Q3SYG4 887 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 CEP120Q8N960 986 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 CNOT10Q9H9A5 744 aaKnown RBP9.04□□□□□ -0.96
RPAIN-215ENST00000575112 SAYSD1Q9NPB0 183 aa9.04□□□□□ -0.96
RPAIN-215ENST00000575112 NOP53Q9NZM5 478 aaKnown RBP9.04□□□□□ -0.96
RPAIN-215ENST00000575112 MYH11P35749 1972 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 BRCA2P51587 3418 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 COL22A1Q8NFW1 1626 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 CES2O00748 559 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 BANF1O75531 89 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 MYCP01106 439 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 BASP1P80723 227 aaKnown RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 ORC2Q13416 577 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 WDR72Q3MJ13 1102 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 FAXCQ5TGI0 409 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 ANO5Q75V66 913 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 GMCL1P1Q8NEA9 526 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 PLEKHO2Q8TD55 490 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 UCMAQ8WVF2 138 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 TGS1Q96RS0 853 aaKnown RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 MYLK2Q9H1R3 596 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 LAMA3Q16787 3333 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 GAS8O95995 478 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 EPHB2P29323 1055 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 CLCN3P51790 818 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 NOP14P78316 857 aaKnown RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 ITIH4Q14624 930 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 TAF11Q15544 211 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 PPP6R3Q5H9R7 873 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 LONP2Q86WA8 852 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 C3orf20Q8ND61 904 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 UBA3Q8TBC4 463 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 CENPTQ96BT3 561 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 KREMEN1Q96MU8 473 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 SYT15Q9BQS2 421 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 SYT11Q9BT88 431 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 MTMR12Q9C0I1 747 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 ZNF302Q9NR11 478 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 TBC1D22BQ9NU19 505 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 HEY1Q9Y5J3 304 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 CSADQ9Y600 493 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 PASKQ96RG2 1323 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 ATAD5Q96QE3 1844 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 CCDC78A2IDD5 438 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 DDNO94850 711 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 BRAFP15056 766 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 SIX1Q15475 284 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 SCARA3Q6AZY7 606 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 ANO7Q6IWH7 933 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 CASC4Q6P4E1 433 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 RFWD3Q6PCD5 774 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 ASRGL1Q7L266 308 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 ZNF280CQ8ND82 737 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 BORCS6Q96GS4 357 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 PRR11Q96HE9 360 aaPredicted RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 MCEEQ96PE7 176 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 MIS12Q9H081 205 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 ARHGEF3Q9NR81 526 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 PIH1D1Q9NWS0 290 aaKnown RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 R3HDM2Q9Y2K5 976 aaKnown RBP9.03□□□□□ -0.96
RPAIN-215ENST00000575112 UMODL1Q5DID0 1318 aa9.03□□□□□ -0.96
RPAIN-215ENST00000575112 ALADP13716 330 aa9.02□□□□□ -0.96
RPAIN-215ENST00000575112 TNFSF9P41273 254 aa9.02□□□□□ -0.96
RPAIN-215ENST00000575112 NRLP54845 237 aa9.02□□□□□ -0.96
RPAIN-215ENST00000575112 SPDYE2Q495Y8 402 aa9.02□□□□□ -0.96
RPAIN-215ENST00000575112 RNF220Q5VTB9 566 aa9.02□□□□□ -0.96
RPAIN-215ENST00000575112 ZNF772Q68DY9 489 aaPredicted RBP9.02□□□□□ -0.96
RPAIN-215ENST00000575112 EPM2AIP1Q7L775 607 aaPredicted RBP9.02□□□□□ -0.96
RPAIN-215ENST00000575112 SPATA21Q7Z572 469 aa9.02□□□□□ -0.96
RPAIN-215ENST00000575112 ERP27Q96DN0 273 aa9.02□□□□□ -0.96
RPAIN-215ENST00000575112 OSBPL1AQ9BXW6 950 aa9.02□□□□□ -0.96
RPAIN-215ENST00000575112 NGRNQ9NPE2 291 aaKnown RBP9.02□□□□□ -0.96
RPAIN-215ENST00000575112 NKIRAS1Q9NYS0 192 aa9.02□□□□□ -0.96
RPAIN-215ENST00000575112 C2orf71A6NGG8 1288 aa9.02□□□□□ -0.97
RPAIN-215ENST00000575112 ZNF862O60290 1169 aa9.02□□□□□ -0.97
RPAIN-215ENST00000575112 TMEM253P0C7T8 217 aa9.02□□□□□ -0.97
RPAIN-215ENST00000575112 ATP2A2P16615 1042 aaKnown RBP9.02□□□□□ -0.97
RPAIN-215ENST00000575112 GTF2H1P32780 548 aa9.02□□□□□ -0.97
RPAIN-215ENST00000575112 PEX5P50542 639 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms