RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 BCL7CQ8WUZ0 217 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 PPP2R3CQ969Q6 453 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 MRPL38Q96DV4 380 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 HERC2P3Q9BVR0 1158 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 NDST4Q9H3R1 872 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 NGRNQ9NPE2 291 aaKnown RBP13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 AGAP1Q9UPQ3 857 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 SSX2IPQ9Y2D8 614 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 CDH23Q9H251 3354 aa13.9□□□□□ -0.18
NPLOC4-214ENST00000573876 ANO9A1A5B4 782 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 F8W810 466 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 PIRO00625 290 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 CLSTN1O94985 981 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 CSPG5O95196 566 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 URODP06132 367 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 POLR2BP30876 1174 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 GTF2H1P32780 548 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 FMO5P49326 533 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 TAF6P49848 677 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 COPB1P53618 953 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 MYO1EQ12965 1108 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 SV2CQ496J9 727 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 TIGD5Q53EQ6 642 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 MIIPQ5JXC2 388 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 FAM171A1Q5VUB5 890 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 KRT39Q6A163 491 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 DSTYKQ6XUX3 929 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 LRRC52Q8N7C0 313 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 CDX2Q99626 313 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 TCF25Q9BQ70 676 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 TMEM8AQ9HCN3 771 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 MTMR10Q9NXD2 777 aa13.89□□□□□ -0.19
NPLOC4-214ENST00000573876 CXCL14O95715 111 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 CTSAP10619 480 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 FOSL2P15408 326 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 BRCC3P46736 316 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 GLUD2P49448 558 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 FANCCQ00597 558 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 SMC1AQ14683 1233 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 FILIP1LQ4L180 1135 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 CBWD6Q4V339 395 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 CBWD3Q5JTY5 395 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 CBWD5Q5RIA9 395 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 TDRD10Q5VZ19 366 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 PLPP4Q5VZY2 271 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 PDXDC1Q6P996 788 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 C3orf58Q8NDZ4 430 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 APPL2Q8NEU8 664 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 MYLIPQ8WY64 445 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 SUSD3Q96L08 255 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 NAP1L5Q96NT1 182 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 TTPALQ9BTX7 342 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 GPR62Q9BZJ7 368 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 ZBP1Q9H171 429 aa13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 MRPL17Q9NRX2 175 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-214ENST00000573876 PPEF2O14830 753 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 SYN3O14994 580 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 VNN1O95497 513 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 POU3F3P20264 500 aaPredicted RBP13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 IGFBP6P24592 240 aaPredicted RBP13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 DNAJB1P25685 340 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 MXI1P50539 228 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 UBASH3AP57075 661 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 LILRA4P59901 499 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 ERVFC1P60507 584 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 CETN1Q12798 172 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 ADGRE1Q14246 886 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 ZACNQ401N2 412 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 C15orf39Q6ZRI6 1047 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 APTXQ7Z2E3 356 aaKnown RBP13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 GPR65Q8IYL9 337 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 CCDC150Q8NCX0 1101 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 SENP8Q96LD8 212 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 GUCD1Q96NT3 240 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 VN1R3Q9BXE9 311 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 SIX4Q9UIU6 781 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 PCDHB8Q9UN66 801 aa13.87□□□□□ -0.19
NPLOC4-214ENST00000573876 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 KPNA7A9QM74 516 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 I3L4J1 428 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 C2CD2LO14523 706 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 FSCN2O14926 492 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 N4BP1O75113 896 aaKnown RBP13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 LRRN2O75325 713 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 HLA-DRAP01903 254 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 ODC1P11926 461 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 ATICP31939 592 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 PIK3CAP42336 1068 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 MYL6P60660 151 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 DSG1Q02413 1049 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 CREMQ03060 361 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 UBXN1Q04323 297 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 NCOA4Q13772 614 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 CAMK1Q14012 370 aa13.86□□□□□ -0.19
NPLOC4-214ENST00000573876 SGSM1Q2NKQ1 1148 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms