RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 RIN2Q8WYP3 895 aaPredicted RBP18.61■□□□□ 0.57
LITAF-212ENST00000573332 EEF2KMTQ96G04 330 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 FAM84AQ96KN4 292 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 B3GALT6Q96L58 329 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 KLHL5Q96PQ7 755 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 EMILIN2Q9BXX0 1053 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 METTL14Q9HCE5 456 aaKnown RBP18.61■□□□□ 0.57
LITAF-212ENST00000573332 BACE2Q9Y5Z0 518 aa18.61■□□□□ 0.57
LITAF-212ENST00000573332 PRRC2BQ5JSZ5 2229 aaKnown RBP18.61■□□□□ 0.57
LITAF-212ENST00000573332 KPNA7A9QM74 516 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 TULP1O00294 542 aaPredicted RBP18.6■□□□□ 0.57
LITAF-212ENST00000573332 FGFR1OPO95684 399 aaKnown RBP18.6■□□□□ 0.57
LITAF-212ENST00000573332 STAU1O95793 577 aaKnown RBP18.6■□□□□ 0.57
LITAF-212ENST00000573332 GNA14O95837 355 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 CST3P01034 146 aaPredicted RBP18.6■□□□□ 0.57
LITAF-212ENST00000573332 CYP11A1P05108 521 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 TYMPP19971 482 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 GTF2H1P32780 548 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 NRIP1P48552 1158 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 MARSP56192 900 aaKnown RBP18.6■□□□□ 0.57
LITAF-212ENST00000573332 KCNC3Q14003 757 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 ZACNQ401N2 412 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 SCARA3Q6AZY7 606 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 CAVIN1Q6NZI2 390 aaKnown RBP18.6■□□□□ 0.57
LITAF-212ENST00000573332 SASS6Q6UVJ0 657 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 DSTYKQ6XUX3 929 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 FRMD5Q7Z6J6 570 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 PPFIBP1Q86W92 1011 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 CEP57Q86XR8 500 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 EFHBQ8N7U6 833 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 PABPC5Q96DU9 382 aaKnown RBP18.6■□□□□ 0.57
LITAF-212ENST00000573332 SENP8Q96LD8 212 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 GDAP2Q9NXN4 497 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 MTRRQ9UBK8 725 aa18.6■□□□□ 0.57
LITAF-212ENST00000573332 ARMCX3Q9UH62 379 aaPredicted RBP18.6■□□□□ 0.57
LITAF-212ENST00000573332 R3HCC1Q9Y3T6 440 aaKnown RBP18.6■□□□□ 0.57
LITAF-212ENST00000573332 C2CD2LO14523 706 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 TBC1D4O60343 1298 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 CLASP2O75122 1294 aaKnown RBP18.59■□□□□ 0.57
LITAF-212ENST00000573332 OAZ2O95190 189 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 KRT19P08727 400 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 MYO1EQ12965 1108 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 ADAM15Q13444 863 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 PSMD5Q16401 504 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 VARS2Q5ST30 1063 aaKnown RBP18.59■□□□□ 0.57
LITAF-212ENST00000573332 TDRD10Q5VZ19 366 aaKnown RBP18.59■□□□□ 0.57
LITAF-212ENST00000573332 PRSS55Q6UWB4 352 aaPredicted RBP18.59■□□□□ 0.57
LITAF-212ENST00000573332 TMEM184AQ6ZMB5 413 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 SV2AQ7L0J3 742 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 RBM23Q86U06 439 aaKnown RBP18.59■□□□□ 0.57
LITAF-212ENST00000573332 SRRTQ9BXP5 876 aaKnown RBP18.59■□□□□ 0.57
LITAF-212ENST00000573332 OXCT2Q9BYC2 517 aaPredicted RBP18.59■□□□□ 0.57
LITAF-212ENST00000573332 VRTNQ9H8Y1 702 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 ANO10Q9NW15 660 aa18.59■□□□□ 0.57
LITAF-212ENST00000573332 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.58■□□□□ 0.56
LITAF-212ENST00000573332 H7C4K7 107 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 PER2O15055 1255 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 TEX28O15482 410 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 STX10O60499 249 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 LETM1O95202 739 aaPredicted RBP18.58■□□□□ 0.56
LITAF-212ENST00000573332 ADH1AP07327 375 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 ODC1P11926 461 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 ATICP31939 592 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 CA8P35219 290 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 NDUFV1P49821 464 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 PPP3CAQ08209 521 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 DPH6Q7L8W6 267 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 SLC22A17Q8WUG5 538 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 PPM1EQ8WY54 764 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 HPDLQ96IR7 371 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 CLSTN3Q9BQT9 956 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 TMEM8AQ9HCN3 771 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 DSEQ9UL01 958 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 COG5Q9UP83 839 aa18.58■□□□□ 0.56
LITAF-212ENST00000573332 CYB561D2O14569 222 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 VNN1O95497 513 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 TRIM49P0CI25 452 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 TRIM49CP0CI26 452 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 KLRC2P26717 231 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 GTF2F1P35269 517 aaKnown RBP eCLIP18.57■□□□□ 0.56
LITAF-212ENST00000573332 YWHAHQ04917 246 aaPredicted RBP18.57■□□□□ 0.56
LITAF-212ENST00000573332 BIRC3Q13489 604 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 TRPC3Q13507 836 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 STX1AQ16623 288 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 SLC8B1Q6J4K2 584 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 LIMS2Q7Z4I7 341 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 SPATA18Q8TC71 538 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 SLC35C1Q96A29 364 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 XYLT2Q9H1B5 865 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 IGFLR1Q9H665 355 aa18.57■□□□□ 0.56
LITAF-212ENST00000573332 PHACTR2O75167 634 aa18.56■□□□□ 0.56
LITAF-212ENST00000573332 FAM163BP0C2L3 166 aa18.56■□□□□ 0.56
LITAF-212ENST00000573332 GCLMP48507 274 aa18.56■□□□□ 0.56
LITAF-212ENST00000573332 CLCN4P51793 760 aa18.56■□□□□ 0.56
LITAF-212ENST00000573332 NCOA4Q13772 614 aa18.56■□□□□ 0.56
LITAF-212ENST00000573332 RAB33AQ14088 237 aa18.56■□□□□ 0.56
LITAF-212ENST00000573332 CCDC40Q4G0X9 1142 aa18.56■□□□□ 0.56
LITAF-212ENST00000573332 KRT39Q6A163 491 aa18.56■□□□□ 0.56
LITAF-212ENST00000573332 ZNF280DQ6N043 979 aa18.56■□□□□ 0.56
LITAF-212ENST00000573332 LILRA6Q6PI73 481 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms