RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 FSIP1Q8NA03 581 aa21.8■■□□□ 1.08
NUP88-204ENST00000572290 ZNF461Q8TAF7 563 aa21.8■■□□□ 1.08
NUP88-204ENST00000572290 EDAQ92838 391 aa21.8■■□□□ 1.08
NUP88-204ENST00000572290 LRFN3Q9BTN0 628 aa21.8■■□□□ 1.08
NUP88-204ENST00000572290 WDR27A2RRH5 827 aa21.79■■□□□ 1.08
NUP88-204ENST00000572290 TGFB1I1O43294 461 aa21.79■■□□□ 1.08
NUP88-204ENST00000572290 KLRC4O43908 158 aa21.79■■□□□ 1.08
NUP88-204ENST00000572290 ABLIM3O94929 683 aa21.79■■□□□ 1.08
NUP88-204ENST00000572290 TYMPP19971 482 aa21.79■■□□□ 1.08
NUP88-204ENST00000572290 ELF1P32519 619 aa21.79■■□□□ 1.08
NUP88-204ENST00000572290 WNT7BP56706 349 aa21.79■■□□□ 1.08
NUP88-204ENST00000572290 TFAMQ00059 246 aaKnown RBP21.79■■□□□ 1.08
NUP88-204ENST00000572290 PTPN21Q16825 1174 aa21.79■■□□□ 1.08
NUP88-204ENST00000572290 SENP8Q96LD8 212 aa21.79■■□□□ 1.08
NUP88-204ENST00000572290 HSPBP1Q9NZL4 362 aa21.79■■□□□ 1.08
NUP88-204ENST00000572290 C5orf42Q9H799 3197 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 ARHGEF37A1IGU5 675 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 SPTLC1O15269 473 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 CCL16O15467 120 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 XYLBO75191 536 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 OAZ2O95190 189 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 MYL1P05976 194 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 ODC1P11926 461 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 SNRPFP62306 86 aaKnown RBP21.78■■□□□ 1.08
NUP88-204ENST00000572290 ZXDAP98168 799 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 BMT2Q1RMZ1 405 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 CACTINQ8WUQ7 758 aaKnown RBP21.78■■□□□ 1.08
NUP88-204ENST00000572290 OXCT2Q9BYC2 517 aaPredicted RBP21.78■■□□□ 1.08
NUP88-204ENST00000572290 KIAA1586Q9HCI6 787 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 AGPAT3Q9NRZ7 376 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 EXOC1Q9NV70 894 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 LIMD1Q9UGP4 676 aa21.78■■□□□ 1.08
NUP88-204ENST00000572290 ZNF233A6NK53 670 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 POU2F2P09086 479 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 ATF2P15336 505 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 TAF6P49848 677 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 PSMD2Q13200 908 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 KMT5BQ4FZB7 885 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 TPGS2Q68CL5 300 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 HS2ST1Q7LGA3 356 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 GRASPQ7Z6J2 395 aaPredicted RBP21.77■■□□□ 1.08
NUP88-204ENST00000572290 GOLPH3LQ9H4A5 285 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 PDE11AQ9HCR9 933 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 POLIQ9UNA4 740 aa21.77■■□□□ 1.08
NUP88-204ENST00000572290 NCOR1O75376 2440 aa21.76■■□□□ 1.07
NUP88-204ENST00000572290 OR6C75A6NL08 312 aa21.76■■□□□ 1.07
NUP88-204ENST00000572290 PRR33A8MZF0 331 aa21.76■■□□□ 1.07
NUP88-204ENST00000572290 PRRG1O14668 218 aa21.76■■□□□ 1.07
NUP88-204ENST00000572290 CLIC2O15247 247 aa21.76■■□□□ 1.07
NUP88-204ENST00000572290 CPB1P15086 417 aa21.76■■□□□ 1.07
NUP88-204ENST00000572290 GBP2P32456 591 aaPredicted RBP21.76■■□□□ 1.07
NUP88-204ENST00000572290 OVOS1Q6IE37 1185 aa21.76■■□□□ 1.07
NUP88-204ENST00000572290 CBWD2Q8IUF1 395 aa21.76■■□□□ 1.07
NUP88-204ENST00000572290 ZNF560Q96MR9 790 aa21.76■■□□□ 1.07
NUP88-204ENST00000572290 CYP4F11Q9HBI6 524 aa21.76■■□□□ 1.07
NUP88-204ENST00000572290 AFF4Q9UHB7 1163 aaKnown RBP21.76■■□□□ 1.07
NUP88-204ENST00000572290 PLXNA3P51805 1871 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 N4BP1O75113 896 aaKnown RBP21.75■■□□□ 1.07
NUP88-204ENST00000572290 ASGR2P07307 311 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 PNPLA4P41247 253 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 STK4Q13043 487 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 SURF1Q15526 300 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 KNOP1Q1ED39 458 aaKnown RBP21.75■■□□□ 1.07
NUP88-204ENST00000572290 SV2CQ496J9 727 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 KRBA2Q6ZNG9 492 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 GET4Q7L5D6 327 aaPredicted RBP21.75■■□□□ 1.07
NUP88-204ENST00000572290 TCEAL8Q8IYN2 117 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 C1orf127Q8N9H9 656 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 CGNQ9P2M7 1197 aaKnown RBP21.75■■□□□ 1.07
NUP88-204ENST00000572290 DSEQ9UL01 958 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 MAFFQ9ULX9 164 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 AGAP1Q9UPQ3 857 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 SORCS3Q9UPU3 1222 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 CITO14578 2027 aa21.75■■□□□ 1.07
NUP88-204ENST00000572290 CYB561D2O14569 222 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 ZNF202O95125 648 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 SEC24AO95486 1093 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 LRG1P02750 347 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 RPN1P04843 607 aaKnown RBP21.74■■□□□ 1.07
NUP88-204ENST00000572290 ITGB3P05106 788 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 CYP11A1P05108 521 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 TMEM191BP0C7N4 346 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 FSHRP23945 695 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 POLR2BP30876 1174 aaKnown RBP21.74■■□□□ 1.07
NUP88-204ENST00000572290 CYP2J2P51589 502 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 NTHL1P78549 312 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 MTMR3Q13615 1198 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 TRIM67Q6ZTA4 783 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 METTL23Q86XA0 190 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 XXYLT1Q8NBI6 393 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 RDH13Q8NBN7 331 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 KIAA0895Q8NCT3 520 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 CCDC47Q96A33 483 aaKnown RBP21.74■■□□□ 1.07
NUP88-204ENST00000572290 BORCS6Q96GS4 357 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 MYADMQ96S97 322 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.74■■□□□ 1.07
NUP88-204ENST00000572290 ITGA11Q9UKX5 1188 aa21.74■■□□□ 1.07
NUP88-204ENST00000572290 VWA8A3KMH1 1905 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 GOLGA6L4A6NEF3 574 aa21.73■■□□□ 1.07
NUP88-204ENST00000572290 KPNA7A9QM74 516 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms