RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 IP6K2Q9UHH9 426 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 PCDHB4Q9Y5E5 795 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 SMCHD1A6NHR9 2005 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 TMEM150BA6NC51 233 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 TLR3O15455 904 aaKnown RBP11.39□□□□□ -0.59
CCDC40-207ENST00000572253 MAGEB2O15479 319 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 ASMTLO95671 621 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 TROVE2P10155 538 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC40-207ENST00000572253 ATF7P17544 494 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-207ENST00000572253 ABCD1P33897 745 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 SLC18A1P54219 525 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 WDR4P57081 412 aaKnown RBP11.39□□□□□ -0.59
CCDC40-207ENST00000572253 MCCD1P59942 119 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-207ENST00000572253 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
CCDC40-207ENST00000572253 ANKRD20A2Q5SQ80 823 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 ANKRD20A1Q5TYW2 823 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 ANKRD20A3Q5VUR7 823 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 KAZNQ674X7 775 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 CGB2Q6NT52 195 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 IL31RAQ8NI17 732 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 FBXL18Q96ME1 805 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 HERPUD2Q9BSE4 406 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 MYPNQ86TC9 1320 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 KRT1P04264 644 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 LMNTD2Q8IXW0 634 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 CPXCR1Q8N123 301 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 FBXO41Q8TF61 875 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 GJD4Q96KN9 370 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-207ENST00000572253 CEP170P1Q96L14 293 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 E7ENQ6 273 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 CALCAP01258 141 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 EIF2AK2P19525 551 aaKnown RBP11.38□□□□□ -0.59
CCDC40-207ENST00000572253 PHBP35232 272 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 ARSEP51690 589 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 PLCB3Q01970 1234 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 GPS1Q13098 491 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 PDK4Q16654 411 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 UGCGQ16739 394 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 EAPPQ56P03 285 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-207ENST00000572253 MIS18BP1Q6P0N0 1132 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 MON1BQ7L1V2 547 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 FAM151AQ8WW52 585 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 PARVAQ9NVD7 372 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 SLC5A4Q9NY91 659 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 KCNG1Q9UIX4 513 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 UBR3Q6ZT12 1888 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 CLRN2A0PK11 232 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 LIN7AO14910 233 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-207ENST00000572253 HLA-DRAP01903 254 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 CYP1A1P04798 512 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-207ENST00000572253 TARSP26639 723 aaKnown RBP11.38□□□□□ -0.59
CCDC40-207ENST00000572253 LIG4P49917 911 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 TAS2R40P59535 323 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 RNASELQ05823 741 aaKnown RBP11.38□□□□□ -0.59
CCDC40-207ENST00000572253 MGAT5Q09328 741 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 MORF4L2Q15014 288 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 C2CD6Q53TS8 623 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 MEX3CQ5U5Q3 659 aaKnown RBP11.38□□□□□ -0.59
CCDC40-207ENST00000572253 CAPRIN2Q6IMN6 1127 aaKnown RBP11.38□□□□□ -0.59
CCDC40-207ENST00000572253 RGS9BPQ6ZS82 235 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 KCNV2Q8TDN2 545 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 ELMO3Q96BJ8 720 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 ZNF570Q96NI8 536 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 PSMC3IPQ9P2W1 217 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-207ENST00000572253 SLC24A2Q9UI40 661 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 NFIBO00712 420 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 HNRNPCL1O60812 293 aaKnown RBP11.38□□□□□ -0.59
CCDC40-207ENST00000572253 KLRC2P26717 231 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 GNA15P30679 374 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 TSNAXIP1Q2TAA8 658 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 ZNF449Q6P9G9 518 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 CAPN12Q6ZSI9 719 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 NLRX1Q86UT6 975 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 PASD1Q8IV76 773 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 MCPH1Q8NEM0 835 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 RDM1Q8NG50 284 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 ATP6V0A1Q93050 837 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 SPDL1Q96EA4 605 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 TMEM237Q96Q45 408 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 SENP7Q9BQF6 1050 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 RNPEPL1Q9HAU8 725 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 HOMER2Q9NSB8 354 aa11.38□□□□□ -0.59
CCDC40-207ENST00000572253 LIASO43766 372 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 FDX1P10109 184 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 GCKP35557 465 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 PCK1P35558 622 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 DLGAP5Q15398 846 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 ANKS1BQ7Z6G8 1248 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 ABRAQ8N0Z2 381 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 C4orf33Q8N1A6 199 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 TEX9Q8N6V9 391 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 FEZF2Q8TBJ5 459 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 MRRFQ96E11 262 aaKnown RBP11.37□□□□□ -0.59
CCDC40-207ENST00000572253 COL20A1Q9P218 1284 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 HAO1Q9UJM8 370 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 UMODL1Q5DID0 1318 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 EDF1O60869 148 aaKnown RBP11.37□□□□□ -0.59
CCDC40-207ENST00000572253 CALB2P22676 271 aa11.37□□□□□ -0.59
CCDC40-207ENST00000572253 CAP2P40123 477 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms