RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 ATF7IP2Q5U623 682 aa17.18■□□□□ 0.34
RAB40B-206ENST00000571995 DARS2Q6PI48 645 aaKnown RBP17.18■□□□□ 0.34
RAB40B-206ENST00000571995 ZNF662Q6ZS27 426 aa17.18■□□□□ 0.34
RAB40B-206ENST00000571995 IQCKQ8N0W5 287 aa17.18■□□□□ 0.34
RAB40B-206ENST00000571995 MYCBPAPQ8TBZ2 947 aa17.18■□□□□ 0.34
RAB40B-206ENST00000571995 RAPGEF5Q92565 580 aa17.18■□□□□ 0.34
RAB40B-206ENST00000571995 KLRG1Q96E93 195 aa17.18■□□□□ 0.34
RAB40B-206ENST00000571995 GPRC5DQ9NZD1 345 aa17.18■□□□□ 0.34
RAB40B-206ENST00000571995 CHRNB2P17787 502 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 CYP2B6P20813 491 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 MMP14P50281 582 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 PTENP60484 403 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 TFDP1Q14186 410 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 PAN2Q504Q3 1202 aaKnown RBP17.17■□□□□ 0.34
RAB40B-206ENST00000571995 HHATQ5VTY9 493 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 TAOK1Q7L7X3 1001 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 CCNYQ8ND76 341 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 CAVIN3Q969G5 261 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 HESX1Q9UBX0 185 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 ALDH5A1P51649 535 aaPredicted RBP17.17■□□□□ 0.34
RAB40B-206ENST00000571995 LAMTOR4Q0VGL1 99 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 EEF1DP3Q658K8 133 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 CALR3Q96L12 384 aaKnown RBP17.17■□□□□ 0.34
RAB40B-206ENST00000571995 DMAC2Q9NW81 257 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 RASA4BC9J798 803 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 RASA4O43374 803 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 RARBP10826 455 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 KRT3P12035 628 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 TGFB2P61812 414 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 TTLL4Q14679 1199 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 HIBCHQ6NVY1 386 aaPredicted RBP17.17■□□□□ 0.34
RAB40B-206ENST00000571995 ARMC9Q7Z3E5 817 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 TMBIM4Q9HC24 238 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 NAV1Q8NEY1 1877 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 ATRNL1Q5VV63 1379 aa17.17■□□□□ 0.34
RAB40B-206ENST00000571995 TCP11X1B4DZS4 312 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 PODXLO00592 558 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 DDX3YO15523 660 aaKnown RBP17.16■□□□□ 0.34
RAB40B-206ENST00000571995 NPTXRO95502 500 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 MAPTP10636 758 aaKnown RBP17.16■□□□□ 0.34
RAB40B-206ENST00000571995 CATSPERGQ6ZRH7 1159 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 RHOT1Q8IXI2 618 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 FAM71AQ8IYT1 594 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 CDCA5Q96FF9 252 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 CFAP36Q96G28 342 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 EPN3Q9H201 632 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 PSD3Q9NYI0 1048 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
RAB40B-206ENST00000571995 DOCK2Q92608 1830 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 TCF4P15884 667 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 CREB1P16220 341 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 POLR2BP30876 1174 aaKnown RBP17.16■□□□□ 0.34
RAB40B-206ENST00000571995 CHKAP35790 457 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 TAS2R40P59535 323 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 PLCB4Q15147 1175 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 HADHQ16836 314 aaKnown RBP17.16■□□□□ 0.34
RAB40B-206ENST00000571995 SLC39A4Q6P5W5 647 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 VSIG1Q86XK7 387 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 MCOLN2Q8IZK6 566 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 SLC16A10Q8TF71 515 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 RBM15Q96T37 977 aaKnown RBP eCLIP17.16■□□□□ 0.34
RAB40B-206ENST00000571995 CDC42EP4Q9H3Q1 356 aaKnown RBP17.16■□□□□ 0.34
RAB40B-206ENST00000571995 CISHQ9NSE2 258 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 INPP5FQ9Y2H2 1132 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 LCP1P13796 627 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 KCNA3P22001 575 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 CA4P22748 312 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 NRLP54845 237 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 KIF22Q14807 665 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 ZNF606Q8WXB4 792 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 ZNF516Q92618 1163 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 HOMER3Q9NSC5 361 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 FGFR1OP2Q9NVK5 253 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 MYH7BA7E2Y1 1941 aa17.16■□□□□ 0.34
RAB40B-206ENST00000571995 DDX60LQ5H9U9 1706 aaKnown RBP17.15■□□□□ 0.34
RAB40B-206ENST00000571995 INSRRP14616 1297 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 RPS12P25398 132 aaKnown RBP17.15■□□□□ 0.34
RAB40B-206ENST00000571995 ADCYAP1R1P41586 468 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 PDIA2Q13087 525 aaKnown RBP17.15■□□□□ 0.34
RAB40B-206ENST00000571995 HELQQ8TDG4 1101 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 SHC3Q92529 594 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 NPM3O75607 178 aaKnown RBP17.15■□□□□ 0.34
RAB40B-206ENST00000571995 LDHAP00338 332 aaKnown RBP17.15■□□□□ 0.34
RAB40B-206ENST00000571995 KCNA2P16389 499 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 HOXA7P31268 230 aaPredicted RBP17.15■□□□□ 0.34
RAB40B-206ENST00000571995 CLEC16AQ2KHT3 1053 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 ZNF449Q6P9G9 518 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 LENG1Q96BZ8 264 aaPredicted RBP17.15■□□□□ 0.34
RAB40B-206ENST00000571995 TEPSINQ96N21 525 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 NSRP1Q9H0G5 558 aaKnown RBP17.15■□□□□ 0.34
RAB40B-206ENST00000571995 STMN4Q9H169 189 aaPredicted RBP17.15■□□□□ 0.34
RAB40B-206ENST00000571995 SETD4Q9NVD3 440 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 LTBP4Q8N2S1 1624 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 MYL3P08590 195 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 HSPA9P38646 679 aaKnown RBP17.15■□□□□ 0.34
RAB40B-206ENST00000571995 CDH6P55285 790 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 CAPSQ13938 189 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 PPP2R5EQ16537 467 aa17.15■□□□□ 0.34
RAB40B-206ENST00000571995 CCDC197Q8NCU1 140 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms