RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SLC27A3Q5K4L6 730 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 EP400NLQ6ZTU2 488 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 ZCCHC9Q8N567 271 aaKnown RBP18.5■□□□□ 0.55
SCARF1-205ENST00000571272 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.5■□□□□ 0.55
SCARF1-205ENST00000571272 CFAP57Q96MR6 1250 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 VPS37BQ9H9H4 285 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 FEM1BQ9UK73 627 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 CAP2P40123 477 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 SKIV2L2P42285 1042 aaKnown RBP18.5■□□□□ 0.55
SCARF1-205ENST00000571272 MAMLD1Q13495 774 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.5■□□□□ 0.55
SCARF1-205ENST00000571272 GPD1LQ8N335 351 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 CLEC4DQ8WXI8 215 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 HAUS1Q96CS2 278 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 FBXL18Q96ME1 805 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 FAM167BQ9BTA0 163 aa18.5■□□□□ 0.55
SCARF1-205ENST00000571272 TLR3O15455 904 aaKnown RBP18.49■□□□□ 0.55
SCARF1-205ENST00000571272 PIAS1O75925 651 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 ICAM1P05362 532 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 MYBL1P10243 752 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 PECAM1P16284 738 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-205ENST00000571272 TNNI1P19237 187 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 CCDC15Q0P6D6 951 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 USP37Q86T82 979 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 NLGN1Q8N2Q7 840 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 MICAL1Q8TDZ2 1067 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 RAB3IPQ96QF0 476 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-205ENST00000571272 KIAA1683Q9H0B3 1180 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 TBC1D22BQ9NU19 505 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 STARD13Q9Y3M8 1113 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 TESPA1A2RU30 521 aaPredicted RBP18.49■□□□□ 0.55
SCARF1-205ENST00000571272 PSTPIP1O43586 416 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 CA4P22748 312 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 WNT7BP56706 349 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 SPARCL1Q14515 664 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 TRIM11Q96F44 468 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 USH1CQ9Y6N9 552 aa18.49■□□□□ 0.55
SCARF1-205ENST00000571272 CYP1A1P04798 512 aaPredicted RBP18.48■□□□□ 0.55
SCARF1-205ENST00000571272 ARSEP51690 589 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 NFX1Q12986 1120 aaKnown RBP18.48■□□□□ 0.55
SCARF1-205ENST00000571272 GPS1Q13098 491 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 SLC1A5Q15758 541 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 LIN9Q5TKA1 542 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 TMEM270Q6UE05 265 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 RELL1Q8IUW5 271 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 KATNAL2Q8IYT4 538 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 SYTL5Q8TDW5 730 aaPredicted RBP18.48■□□□□ 0.55
SCARF1-205ENST00000571272 DENND1AQ8TEH3 1009 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 ACSF2Q96CM8 615 aaPredicted RBP18.48■□□□□ 0.55
SCARF1-205ENST00000571272 SPDL1Q96EA4 605 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 CEP170P1Q96L14 293 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 SMC6Q96SB8 1091 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 RAVER2Q9HCJ3 691 aaKnown RBP18.48■□□□□ 0.55
SCARF1-205ENST00000571272 BATF3Q9NR55 127 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 A0A1W2PPM1 405 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 BANF1O75531 89 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 CBX6O95503 412 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 GTF2H1P32780 548 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 DGKZQ13574 1117 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 WDR44Q5JSH3 913 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 ENOSF1Q7L5Y1 443 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 ZBED8Q8IZ13 594 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 GOLGA8SH3BPF8 625 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 GOLGA8MH3BSY2 632 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 HLA-DRAP01903 254 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 PTGER2P43116 358 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 YARSP54577 528 aaKnown RBP18.48■□□□□ 0.55
SCARF1-205ENST00000571272 RPL7AP62424 266 aaKnown RBP18.48■□□□□ 0.55
SCARF1-205ENST00000571272 PTP4A2Q12974 167 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 MOGSQ13724 837 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 TAF11Q15544 211 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 BRDTQ58F21 947 aaPredicted RBP18.48■□□□□ 0.55
SCARF1-205ENST00000571272 RIBC1Q8N443 379 aaPredicted RBP18.48■□□□□ 0.55
SCARF1-205ENST00000571272 EXD1Q8NHP7 514 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 LRRC8CQ8TDW0 803 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 TIPINQ9BVW5 301 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 TMEM39BQ9GZU3 492 aa18.48■□□□□ 0.55
SCARF1-205ENST00000571272 WDR64B1ANS9 1081 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 DNALI1O14645 258 aaPredicted RBP18.47■□□□□ 0.55
SCARF1-205ENST00000571272 ABHD2P08910 425 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 NOP14P78316 857 aaKnown RBP18.47■□□□□ 0.55
SCARF1-205ENST00000571272 SP4Q02446 784 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 TRIM68Q6AZZ1 485 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 NIPA1Q7RTP0 329 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 OGFOD1Q8N543 542 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 CNKSR1Q969H4 720 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 LRMDAQ9H2I8 198 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 ZMYND8Q9ULU4 1186 aaPredicted RBP18.47■□□□□ 0.55
SCARF1-205ENST00000571272 PCDHB4Q9Y5E5 795 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 YDJCA8MPS7 323 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 LIASO43766 372 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 IFNB1P01574 187 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 FGFR1P11362 822 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 PIK3CAP42336 1068 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 ACOT2P49753 483 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 MCCD1P59942 119 aaPredicted RBP18.47■□□□□ 0.55
SCARF1-205ENST00000571272 RPS6P62753 249 aaKnown RBP18.47■□□□□ 0.55
SCARF1-205ENST00000571272 MFSD7Q6UXD7 560 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 ANKMY2Q8IV38 441 aa18.47■□□□□ 0.55
SCARF1-205ENST00000571272 FNBP1Q96RU3 617 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms