RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 LRRC10BA6NIK2 292 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 MEIS3P2A8K0S8 358 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 NRDCO43847 1150 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 TLL1O43897 1013 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZC3H11AO75152 810 aaKnown RBP eCLIP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 POMCP01189 267 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 TBXAS1P24557 533 aaPredicted RBP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 ATICP31939 592 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 WNT7BP56706 349 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 YWHAEP62258 255 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 NOP14P78316 857 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 CLDN10P78369 228 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 DEFB103AP81534 67 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 RBP5P82980 135 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 CCDC173Q0VFZ6 552 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 TUSC3Q13454 348 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 RAPGEF1Q13905 1077 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 GPNMBQ14956 572 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 SV2CQ496J9 727 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 PAN2Q504Q3 1202 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZNF667Q5HYK9 610 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 CLLU1OSQ5K130 101 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 TRIM65Q6PJ69 517 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 SCARA5Q6ZMJ2 495 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZNF365Q70YC5 407 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 TRAPPC11Q7Z392 1133 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZNF598Q86UK7 904 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 FMNL3Q8IVF7 1028 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 VSTM4Q8IW00 320 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 PPM1KQ8N3J5 372 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 LRRC52Q8N7C0 313 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 C1orf127Q8N9H9 656 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 SPC24Q8NBT2 197 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 OR5B17Q8NGF7 314 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 TAS1R2Q8TE23 839 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 TAF4BQ92750 862 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 RNPC3Q96LT9 517 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 NAP1L5Q96NT1 182 aaPredicted RBP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 PPP1R10Q96QC0 940 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 SPAG5Q96R06 1193 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 ERGIC2Q96RQ1 377 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 NUP58Q9BVL2 599 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 DNAI2Q9GZS0 605 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 NIF3L1Q9GZT8 377 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 APEX2Q9UBZ4 518 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 AGAP1Q9UPQ3 857 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 NUB1Q9Y5A7 615 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 SLC4A7Q9Y6M7 1214 aa7.08□□□□□ -1.28
CTDNEP1-204ENST00000570484 PODXLO00592 558 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 PTGESO14684 152 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 PMM2O15305 246 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 INPPL1O15357 1258 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 TEX33O43247 280 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 OFD1O75665 1012 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 AP1G2O75843 785 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 F12P00748 615 aaPredicted RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 ATP2A2P16615 1042 aaKnown RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 RPL9P32969 192 aaKnown RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 MAGEA10P43363 369 aaPredicted RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 OR1G1P47890 313 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 TAF6P49848 677 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 GUCY2FP51841 1108 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 MFAP3P55082 362 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 FAM189BP81408 668 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 LRMPQ12912 555 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 BTG3Q14201 252 aaPredicted RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 NR1I3Q14994 352 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 PTPRNQ16849 979 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 TCTN1Q2MV58 587 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 SGSM1Q2NKQ1 1148 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 EPC2Q52LR7 807 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 XKR4Q5GH76 650 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 TMEM240Q5SV17 173 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 C1orf220Q5T0J3 134 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 ENOSF1Q7L5Y1 443 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 APTXQ7Z2E3 356 aaKnown RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 RTN4RL1Q86UN2 441 aaPredicted RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 CNGA4Q8IV77 575 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 HERVK_113Q902F9 699 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 C18orf25Q96B23 403 aaPredicted RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 HPDLQ96IR7 371 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 FAM84AQ96KN4 292 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZMAT2Q96NC0 199 aaKnown RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 MMS19Q96T76 1030 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 UBE2OQ9C0C9 1292 aaKnown RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 GOLGA2P5Q9HBQ8 144 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 AAASQ9NRG9 546 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 RNF19AQ9NV58 838 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 TBC1D13Q9NVG8 400 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 CEP72Q9P209 647 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 PRG3Q9Y2Y8 225 aaPredicted RBP7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 BRCA2P51587 3418 aa7.07□□□□□ -1.28
CTDNEP1-204ENST00000570484 A0A1W2PQJ5 194 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 MEFVO15553 781 aaPredicted RBP7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 AP5Z1O43299 807 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 TRAPPC3O43617 180 aa7.06□□□□□ -1.28
CTDNEP1-204ENST00000570484 HUS1O60921 280 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms