RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 UBE2Q2Q8WVN8 375 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 PPP1R10Q96QC0 940 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 ISCUQ9H1K1 167 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 LZTFL1Q9NQ48 299 aa11.78□□□□□ -0.52
NPLOC4-203ENST00000570300 H2AFZP0C0S5 128 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 SELPP16109 830 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 PAX3P23760 479 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 CD52P31358 61 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 PDE6CP51160 858 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 GNG11P61952 73 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 FAM189BP81408 668 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 FMO1Q01740 532 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 INCA1Q0VD86 236 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 MYO1EQ12965 1108 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 NFX1Q12986 1120 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 MBTPS1Q14703 1052 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 TRIM72Q6ZMU5 477 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 H2AFVQ71UI9 128 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 ZNF598Q86UK7 904 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 SLC47A2Q86VL8 602 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 GLYCTKQ8IVS8 523 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 HPDLQ96IR7 371 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 ARID3AQ99856 593 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 FTHL17Q9BXU8 183 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 RGS18Q9NS28 235 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 CISHQ9NSE2 258 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 SLC38A7Q9NVC3 462 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 GDAP2Q9NXN4 497 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 R3HCC1Q9Y3T6 440 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 HES2Q9Y543 173 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 UMODL1Q5DID0 1318 aa11.77□□□□□ -0.53
NPLOC4-203ENST00000570300 A0A0U1RQJ8 604 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 ANKRD62A6NC57 917 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 TLR3O15455 904 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 RTN2O75298 545 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 EOMESO95936 686 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 PAEPP09466 180 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 TMEM253P0C7T8 217 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 GHRP10912 638 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 ITGA4P13612 1032 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 ATF7P17544 494 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 AKAP5P24588 427 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 POLR2BP30876 1174 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 USP8P40818 1118 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 TERF1P54274 439 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 HADHBP55084 474 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 TUBB2AQ13885 445 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 WDR72Q3MJ13 1102 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 DNTTIP2Q5QJE6 756 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 C9orf57Q5W0N0 161 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 SCARA3Q6AZY7 606 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 LRRC8DQ7L1W4 858 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 RBBP8NLQ8NC74 664 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 GSTCDQ8NEC7 633 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 TRIM58Q8NG06 486 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 U2AF1L4Q8WU68 220 aaKnown RBP11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 ATRIPQ8WXE1 791 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 RSPH1Q8WYR4 309 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 PGBD4Q96DM1 585 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 TUBB2BQ9BVA1 445 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 KIAA1257Q9ULG3 409 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 AGAP1Q9UPQ3 857 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 PCDHB4Q9Y5E5 795 aa11.76□□□□□ -0.53
NPLOC4-203ENST00000570300 C9IYK1 514 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 PTGESO14684 152 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 MGEA5O60502 916 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 CILPO75339 1184 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 LSM8O95777 96 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 ABL1P00519 1130 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 CYP1A1P04798 512 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 KRT19P08727 400 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 KRT5P13647 590 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 RPL9P32969 192 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 GJA8P48165 433 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 CTCFP49711 727 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 IFI16Q16666 785 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 TMEM270Q6UE05 265 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 SYT10Q6XYQ8 523 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 SLC39A5Q6ZMH5 540 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 AGMOQ6ZNB7 445 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 DPH6Q7L8W6 267 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 SLC20A1Q8WUM9 679 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 SECISBP2LQ93073 1101 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 VCPIP1Q96JH7 1222 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 ZNF560Q96MR9 790 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 WDR24Q96S15 920 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 PCDHB18PQ96TA0 734 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 OSBPL7Q9BZF2 842 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 ZNF518BQ9C0D4 1074 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 CXCL16Q9H2A7 254 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 TSPYL2Q9H2G4 693 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 L2HGDHQ9H9P8 463 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 PARP2Q9UGN5 583 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 GUCA1BQ9UMX6 200 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 PCDHGC3Q9UN70 934 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 PCDHGC5Q9Y5F6 944 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 NCANO14594 1321 aa11.75□□□□□ -0.53
NPLOC4-203ENST00000570300 SCN1AP35498 2009 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms