RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 C2orf69Q8N8R5 385 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 RNF149Q8NC42 400 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 OR5B17Q8NGF7 314 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 PPTC7Q8NI37 304 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 ALG3Q92685 438 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 RNPC3Q96LT9 517 aaKnown RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 ZBED2Q9BTP6 218 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 PI4K2AQ9BTU6 479 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 NUP85Q9BW27 656 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 ZNF518BQ9C0D4 1074 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 KATNBL1Q9H079 304 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 RNPEPQ9H4A4 650 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 GOLPH3Q9H4A6 298 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 ACP6Q9NPH0 428 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 PDGFCQ9NRA1 345 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 ST7Q9NRC1 585 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 FAM114A2Q9NRY5 505 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 SEPT11Q9NVA2 429 aaKnown RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 PRMT7Q9NVM4 692 aaPredicted RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 PCYOX1Q9UHG3 505 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 NFU1Q9UMS0 254 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 NOC2LQ9Y3T9 749 aaKnown RBP5.75□□□□□ -1.49
SF3B3-213ENST00000569687 NUB1Q9Y5A7 615 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 COL1A2P08123 1366 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 WDR81Q562E7 1941 aa5.75□□□□□ -1.49
SF3B3-213ENST00000569687 PTPRJQ12913 1337 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 GOLGA6L10A0A0M3HER8 536 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 GOLGA6BA6NDN3 693 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 A6NNZ2 444 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 BTBD19C9JJ37 291 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 GOLGA8KD6RF30 607 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 PDHXO00330 501 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 PODXLO00592 558 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 FSCN2O14926 492 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 PHACTR2O75167 634 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 RPS6KA5O75582 802 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 C22orf31O95567 290 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 LSM8O95777 96 aaKnown RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 CST3P01034 146 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 HOXC6P09630 235 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 MCF2P10911 925 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 INSRRP14616 1297 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 ECHS1P30084 290 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 ATICP31939 592 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 CHRNA3P32297 505 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 CDH5P33151 784 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 MAN1A1P33908 653 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 CTNNA1P35221 906 aaKnown RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 GGCXP38435 758 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 PIK3CAP42336 1068 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 PTGIRP43119 386 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 TNNT3P45378 269 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 RWDD2BP57060 319 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 TNFAIP2Q03169 654 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 MBTD1Q05BQ5 628 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 BIRC3Q13489 604 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 MESDQ14696 234 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 TUBB8Q3ZCM7 444 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 LIN9Q5TKA1 542 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 ATF7IP2Q5U623 682 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 DUPD1Q68J44 220 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 DESI1Q6ICB0 168 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 LRIG3Q6UXM1 1119 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 MON1BQ7L1V2 547 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 EEPD1Q7L9B9 569 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 SLC13A5Q86YT5 568 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 FBXO16Q8IX29 292 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 KLHL7Q8IXQ5 586 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 PRELID2Q8N945 189 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 C12orf50Q8NA57 414 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 ZNF564Q8TBZ8 553 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 ZNF606Q8WXB4 792 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 BRI3BPQ8WY22 251 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 IFT81Q8WYA0 676 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 PIK3R5Q8WYR1 880 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 KRT35Q92764 455 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 COPS5Q92905 334 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 SLCO2A1Q92959 643 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 LRRC45Q96CN5 670 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 MRRFQ96E11 262 aaKnown RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 CYFIP2Q96F07 1278 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 ERP44Q9BS26 406 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 TCHPQ9BT92 498 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 AP1M1Q9BXS5 423 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 TXLNGYQ9BZA5 131 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 FAM129AQ9BZQ8 928 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 DDX47Q9H0S4 455 aaKnown RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 RAB17Q9H0T7 212 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 XYLT2Q9H1B5 865 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 LHX5Q9H2C1 402 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 ASB7Q9H672 318 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 LRRC19Q9H756 370 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 EFCC1Q9HA90 598 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 IFT122Q9HBG6 1241 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 MRPL47Q9HD33 250 aaKnown RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 CNOT8Q9UFF9 292 aaKnown RBP5.74□□□□□ -1.49
SF3B3-213ENST00000569687 FAN1Q9Y2M0 1017 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 NR2E1Q9Y466 385 aa5.74□□□□□ -1.49
SF3B3-213ENST00000569687 PCDHB4Q9Y5E5 795 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms