RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 M0QZQ0 153 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 B4GALT3O60512 393 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 TBXAS1P24557 533 aaPredicted RBP25.2■■□□□ 1.62
RAB40C-212ENST00000569575 GUCY2FP51841 1108 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 MYL6P60660 151 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 BMS1Q14692 1282 aaKnown RBP25.2■■□□□ 1.62
RAB40C-212ENST00000569575 PDXDC1Q6P996 788 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 ENOSF1Q7L5Y1 443 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 DDX53Q86TM3 631 aaKnown RBP25.2■■□□□ 1.62
RAB40C-212ENST00000569575 TMEM86AQ8N2M4 240 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 LMO3Q8TAP4 145 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 NT5C1BQ96P26 610 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 DNAI2Q9GZS0 605 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 PLCB1Q9NQ66 1216 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 COLQQ9Y215 455 aaPredicted RBP25.2■■□□□ 1.62
RAB40C-212ENST00000569575 SSX2IPQ9Y2D8 614 aa25.2■■□□□ 1.62
RAB40C-212ENST00000569575 GBF1Q92538 1859 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 LCHNA4D1U4 455 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 KIF4AO95239 1232 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 EFEMP2O95967 443 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 TNNC1P63316 161 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 TAP1Q03518 808 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 WDR72Q3MJ13 1102 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 TOP6BLQ8N6T0 577 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 APPL2Q8NEU8 664 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 PAAF1Q9BRP4 392 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 CYP3A43Q9HB55 503 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 FBXL5Q9UKA1 691 aa25.19■■□□□ 1.62
RAB40C-212ENST00000569575 PRG3Q9Y2Y8 225 aaPredicted RBP25.19■■□□□ 1.62
RAB40C-212ENST00000569575 GOLGA6L3A6NEY3 463 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 HUS1O60921 280 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 TYMPP19971 482 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 DNAJB2P25686 324 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 PON1P27169 355 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 YWHAEP62258 255 aaKnown RBP25.18■■□□□ 1.62
RAB40C-212ENST00000569575 NOP14P78316 857 aaKnown RBP25.18■■□□□ 1.62
RAB40C-212ENST00000569575 GCNT1Q02742 428 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 TRIM65Q6PJ69 517 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 DSTYKQ6XUX3 929 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 TIFAQ96CG3 184 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 MARCH5Q9NX47 278 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 YBX2Q9Y2T7 364 aaKnown RBP25.18■■□□□ 1.62
RAB40C-212ENST00000569575 SCN1AP35498 2009 aa25.18■■□□□ 1.62
RAB40C-212ENST00000569575 NLRC5Q86WI3 1866 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 TACC1O75410 805 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 FGF18O76093 207 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 CYP11A1P05108 521 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 ODC1P11926 461 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 CTNNB1P35222 781 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 PPP2R2DQ66LE6 453 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 PDE12Q6L8Q7 609 aaKnown RBP25.17■■□□□ 1.62
RAB40C-212ENST00000569575 FUT10Q6P4F1 479 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 CD300LGQ6UXG3 332 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.17■■□□□ 1.62
RAB40C-212ENST00000569575 LIMS2Q7Z4I7 341 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 RNF168Q8IYW5 571 aaPredicted RBP25.17■■□□□ 1.62
RAB40C-212ENST00000569575 C3orf58Q8NDZ4 430 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 SEMA4DQ92854 862 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 NAP1L5Q96NT1 182 aaPredicted RBP25.17■■□□□ 1.62
RAB40C-212ENST00000569575 NUP58Q9BVL2 599 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 NIF3L1Q9GZT8 377 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 INTS2Q9H0H0 1204 aaKnown RBP25.17■■□□□ 1.62
RAB40C-212ENST00000569575 IFNKQ9P0W0 207 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 PCDHB8Q9UN66 801 aa25.17■■□□□ 1.62
RAB40C-212ENST00000569575 USP41Q3LFD5 358 aa25.16■■□□□ 1.62
RAB40C-212ENST00000569575 TIGD5Q53EQ6 642 aa25.16■■□□□ 1.62
RAB40C-212ENST00000569575 METTL23Q86XA0 190 aa25.16■■□□□ 1.62
RAB40C-212ENST00000569575 SENP8Q96LD8 212 aa25.16■■□□□ 1.62
RAB40C-212ENST00000569575 EDEM3Q9BZQ6 932 aa25.16■■□□□ 1.62
RAB40C-212ENST00000569575 TRIM5Q9C035 493 aa25.16■■□□□ 1.62
RAB40C-212ENST00000569575 LMAN2LQ9H0V9 348 aa25.16■■□□□ 1.62
RAB40C-212ENST00000569575 APEX2Q9UBZ4 518 aa25.16■■□□□ 1.62
RAB40C-212ENST00000569575 SNX9Q9Y5X1 595 aa25.16■■□□□ 1.62
RAB40C-212ENST00000569575 KIAA1671Q9BY89 1806 aa25.16■■□□□ 1.62
RAB40C-212ENST00000569575 FSD2A1L4K1 749 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 CYB561D2O14569 222 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 PPEF2O14830 753 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 SOD2P04179 222 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 MYOGP15173 224 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 FGFR3P22607 806 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 PBX2P40425 430 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 CREMQ03060 361 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 KCNMA1Q12791 1236 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 FMNL3Q8IVF7 1028 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 KLHL23Q8NBE8 558 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 BCO2Q9BYV7 579 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 XPO4Q9C0E2 1151 aaKnown RBP25.15■■□□□ 1.62
RAB40C-212ENST00000569575 NKX2-4Q9H2Z4 354 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 HCSTQ9UBK5 93 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 SIK3Q9Y2K2 1263 aa25.15■■□□□ 1.62
RAB40C-212ENST00000569575 NT5C1B-RDH14C9J2C7 533 aa25.14■■□□□ 1.62
RAB40C-212ENST00000569575 H3BNC9 293 aa25.14■■□□□ 1.62
RAB40C-212ENST00000569575 SPTLC1O15269 473 aa25.14■■□□□ 1.62
RAB40C-212ENST00000569575 TRIM21P19474 475 aaKnown RBP25.14■■□□□ 1.62
RAB40C-212ENST00000569575 LHX1P48742 406 aa25.14■■□□□ 1.62
RAB40C-212ENST00000569575 MFAP3P55082 362 aa25.14■■□□□ 1.62
RAB40C-212ENST00000569575 SYCP1Q15431 976 aa25.14■■□□□ 1.62
RAB40C-212ENST00000569575 FIGNQ5HY92 759 aa25.14■■□□□ 1.62
RAB40C-212ENST00000569575 FBXO22Q8NEZ5 403 aa25.14■■□□□ 1.62
RAB40C-212ENST00000569575 MRFAP1L1Q96HT8 127 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms