RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 A0A1W2PQD8 194 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 PRRG1O14668 218 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 KIF4AO95239 1232 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 PSAPP07602 524 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 ZNF883P0CG24 379 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 MYL4P12829 197 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 ATF2P15336 505 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 FGFR3P22607 806 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 WEE1P30291 646 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 DNM2P50570 870 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 GALK1P51570 392 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 TMPRSS3P57727 454 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 ROR1Q01973 937 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 BYSLQ13895 437 aaKnown RBP7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 TARBP2Q15633 366 aaKnown RBP7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 MAP7D1Q3KQU3 841 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 TSHZ3Q63HK5 1081 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 SMAP1Q8IYB5 467 aaPredicted RBP7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 CCDC26Q8TAB7 109 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 HASPINQ8TF76 798 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 RLN3Q8WXF3 142 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 EZH1Q92800 747 aaPredicted RBP7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 EXOC4Q96A65 974 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 TMEM176AQ96HP8 235 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 FAM83CQ9BQN1 747 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 ZDHHC5Q9C0B5 715 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 NRSN2Q9GZP1 204 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 PSTPIP2Q9H939 334 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 GABBR1Q9UBS5 961 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 SEPT3Q9UH03 358 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 PCDHA10Q9Y5I2 948 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 INSL5Q9Y5Q6 135 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 ADGRG4Q8IZF6 3080 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 NF1P21359 2839 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 OTOL1A6NHN0 477 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 IPO5O00410 1097 aaKnown RBP7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 AP5Z1O43299 807 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 SMARCA5O60264 1052 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 ALDH1A2O94788 518 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 SEC24AO95486 1093 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 OATP04181 439 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 MCM2P49736 904 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 CCDC173Q0VFZ6 552 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 NFATC3Q12968 1075 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 TUSC3Q13454 348 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 RUNX3Q13761 415 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 SEC23AQ15436 765 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 CRY1Q16526 586 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 PTPRNQ16849 979 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 ARHGAP40Q5TG30 622 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 SLC8B1Q6J4K2 584 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 ANKS3Q6ZW76 656 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 NIPA1Q7RTP0 329 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 SRGAP1Q7Z6B7 1085 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 RHPN2Q8IUC4 686 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 FRMD1Q8N878 549 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 SETD7Q8WTS6 366 aaKnown RBP7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 CEP89Q96ST8 783 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 P2RY13Q9BPV8 354 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 UBAC1Q9BSL1 405 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 EIF2AQ9BY44 585 aaKnown RBP7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 CYP4F11Q9HBI6 524 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 HPS4Q9NQG7 708 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 HELLSQ9NRZ9 838 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 THG1LQ9NWX6 298 aaKnown RBP7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 CEP72Q9P209 647 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 CACNG4Q9UBN1 327 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 TBX20Q9UMR3 447 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 MAN2B2Q9Y2E5 1009 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 HES2Q9Y543 173 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 AK5Q9Y6K8 562 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 ANK1P16157 1881 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 OTOGQ6ZRI0 2925 aa7.38□□□□□ -1.23
HERPUD1-217ENST00000569429 SDK2Q58EX2 2172 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 NID2Q14112 1375 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 A0A1W2PRU2 124 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 SUV39H1O43463 412 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 MYF5P13349 255 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 KRT10P13645 584 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 SREBF1P36956 1147 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 ZNF33AQ06730 810 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 UBE2SQ16763 222 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 PLEKHG6Q3KR16 790 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 BROXQ5VW32 411 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 ERICH1Q86X53 443 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 GPIHBP1Q8IV16 184 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 KSR1Q8IVT5 923 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 HACE1Q8IYU2 909 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 PIBF1Q8WXW3 757 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 CCDC51Q96ER9 411 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 NLRP4Q96MN2 994 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 TBC1D32Q96NH3 1257 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 PHF12Q96QT6 1004 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 SLC4A5Q9BY07 1137 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 LRRC3Q9BY71 257 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 PRDM16Q9HAZ2 1276 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 CPNE5Q9HCH3 593 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 GKN1Q9NS71 199 aa7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 SUCLA2Q9P2R7 463 aaPredicted RBP7.37□□□□□ -1.23
HERPUD1-217ENST00000569429 MMP17Q9ULZ9 603 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms