RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 MRPL58Q14197 206 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 DCAF4L1Q3SXM0 396 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 FOXD4L5Q5VV16 416 aaPredicted RBP12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 C4orf32Q8N8J7 132 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 FOXD4L4Q8WXT5 416 aaPredicted RBP12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MCRS1Q96EZ8 462 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 SHDQ96IW2 340 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ZSWIM3Q96MP5 696 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CCDC43Q96MW1 224 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 BCO2Q9BYV7 579 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CDT1Q9H211 546 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 SMG5Q9UPR3 1016 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 USP24Q9UPU5 2620 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CHD8Q9HCK8 2581 aa12.24□□□□□ -0.45
CHRFAM7A-206ENST00000569278 SMIM28A0A1B0GU29 152 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 A0A1W2PQ27 194 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 A0A1W2PQ64 194 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 A0A1W2PQD8 194 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 LAMTOR5O43504 91 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 LIG1P18858 919 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PROZP22891 400 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 HOXC13P31276 330 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 RPS9P46781 194 aaKnown RBP12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 GAS6Q14393 721 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 GRM2Q14416 872 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 FAM78AQ5JUQ0 283 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ATF7IP2Q5U623 682 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PDXDC1Q6P996 788 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 LEO1Q8WVC0 666 aaPredicted RBP12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 RSPRY1Q96DX4 576 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 HINFPQ9BQA5 517 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ZSCAN32Q9NX65 697 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 GDE1Q9NZC3 331 aa12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MRPS23Q9Y3D9 190 aaKnown RBP12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MAP1BP46821 2468 aaKnown RBP12.23□□□□□ -0.45
CHRFAM7A-206ENST00000569278 OR52Z1P0C646 297 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 U2AF2P26368 475 aaKnown RBP eCLIP12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 GRM5P41594 1212 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ATXN1P54253 815 aaKnown RBP12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PFKPQ01813 784 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 GUCY1B3Q02153 619 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ZBTB41Q5SVQ8 909 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ADALQ6DHV7 355 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 VITQ6UXI7 678 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MAP4K3Q8IVH8 894 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 DEPTORQ8TB45 409 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 C18orf25Q96B23 403 aaPredicted RBP12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ELSPBP1Q96BH3 223 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ASB16Q96NS5 453 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CNTNAP3BQ96NU0 1288 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 NACC1Q96RE7 527 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ACO2Q99798 780 aaKnown RBP12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CNTNAP3Q9BZ76 1288 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CHRDQ9H2X0 955 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 FOXP1Q9H334 677 aaPredicted RBP12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 BRMS1Q9HCU9 246 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 NPDC1Q9NQX5 325 aaPredicted RBP12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ARHGAP28Q9P2N2 729 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TNFSF13BQ9Y275 285 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 INSL5Q9Y5Q6 135 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 SPEGQ15772 3267 aa12.22□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PHLPP2Q6ZVD8 1323 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ARHGEF35A5YM69 484 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 PODXLO00592 558 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 BMP15O95972 392 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ATF2P15336 505 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 MAGEA9P43362 315 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 DMWDQ09019 674 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ZNF174Q15697 407 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ANKS3Q6ZW76 656 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 RTL10Q7L3V2 364 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 KCNK18Q7Z418 384 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 TCEAL8Q8IYN2 117 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ZNF461Q8TAF7 563 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 DNASE1L2Q92874 299 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 UROC1Q96N76 676 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 ADPGKQ9BRR6 497 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 RUSC1Q9BVN2 902 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 LRRC3Q9BY71 257 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 BHMT2Q9H2M3 363 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CRISPLD1Q9H336 500 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 C2orf42Q9NWW7 574 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CEP72Q9P209 647 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 CNTN3Q9P232 1028 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 FBXL5Q9UKA1 691 aa12.21□□□□□ -0.45
CHRFAM7A-206ENST00000569278 NUP210Q8TEM1 1887 aaPredicted RBP12.21□□□□□ -0.46
CHRFAM7A-206ENST00000569278 PP2D1A8MPX8 630 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 PPP6R2O75170 966 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 KRT37O76014 449 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 KCNE1P15382 129 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 GJA1P17302 382 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 NPTX2P47972 431 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 NASPP49321 788 aaPredicted RBP12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 EPHA5P54756 1037 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 OSTNP61366 133 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 ADCY1Q08828 1119 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 IL17AQ16552 155 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 RILPL1Q5EBL4 403 aa12.2□□□□□ -0.46
CHRFAM7A-206ENST00000569278 TMC8Q8IU68 726 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms