RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 LPIN1Q14693 890 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 KNOP1Q1ED39 458 aaKnown RBP7.45□□□□□ -1.22
CNOT1-216ENST00000569240 DEPDC1Q5TB30 811 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 CYP4A22Q5TCH4 519 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 THEMIS2Q5TEJ8 643 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 TTC23Q5W5X9 447 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 C11orf63Q6NUN7 778 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 FBXL16Q8N461 479 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 RAD54LQ92698 747 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 RIC8BQ9NVN3 520 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 RAB26Q9ULW5 256 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 BTBD3Q9Y2F9 522 aa7.45□□□□□ -1.22
CNOT1-216ENST00000569240 ATP6V1G1O75348 118 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 RGS20O76081 388 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 EYA4O95677 639 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 OSBPP22059 807 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PSEN1P49768 467 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 GPS1Q13098 491 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ZC3H12BQ5HYM0 836 aaKnown RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PPIL6Q8IXY8 311 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 KBTBD8Q8NFY9 601 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PARD3BQ8TEW8 1205 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 DPF2Q92785 391 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ATP6V1E2Q96A05 226 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 SLC13A4Q9UKG4 626 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 CDV3Q9UKY7 258 aaKnown RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 KIAA1024Q9UPX6 916 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 NUP153P49790 1475 aaKnown RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 TARSP26639 723 aaKnown RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 RPL22P35268 128 aaKnown RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 EXOSC10Q01780 885 aaKnown RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ERO1BQ86YB8 467 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 MB21D2Q8IYB1 491 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 RTKN2Q8IZC4 609 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PIK3C3Q8NEB9 887 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 VPS33AQ96AX1 596 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 CNDP1Q96KN2 507 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 BDH2Q9BUT1 245 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ZNF556Q9HAH1 456 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 HAO1Q9UJM8 370 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 GTF3C4Q9UKN8 822 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PRPF19Q9UMS4 504 aaKnown RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 SHOC2Q9UQ13 582 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PRELID1Q9Y255 219 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 CPDO75976 1380 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PLEKHG3A1L390 1219 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 NR3C1P04150 777 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ZNF18P17022 549 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ROR1Q01973 937 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 TYSND1Q2T9J0 566 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 RFX4Q33E94 735 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 SYCE2Q6PIF2 218 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ZBTB49Q6ZSB9 765 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 MAP3K14Q99558 947 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 AGPAT1Q99943 283 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PRDM16Q9HAZ2 1276 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 HPSEQ9Y251 543 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 AFF2P51816 1311 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 UMODL1Q5DID0 1318 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 OVOS2A0A0G2JMS6 1433 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ITGA6P23229 1130 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PTDSS1P48651 473 aaKnown RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 MTF1Q14872 753 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PFKFB3Q16875 520 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 TRIM71Q2Q1W2 868 aaKnown RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 UNC5CLQ8IV45 518 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 SFRP1Q8N474 314 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 USHBP1Q8N6Y0 703 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 KYQ8NBH2 561 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 GDPD5Q8WTR4 605 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PRRG3Q9BZD7 231 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ANKHQ9HCJ1 492 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PARVAQ9NVD7 372 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 M0QX08 132 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 FASP25445 335 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ALDH18A1P54886 795 aaKnown RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PRAMEP78395 509 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 CDK16Q00536 496 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 TFDP1Q14186 410 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ARL13BQ3SXY8 428 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 XKRXQ6PP77 449 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 JARID2Q92833 1246 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 GJA10Q969M2 543 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 NUP85Q9BW27 656 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 RHOBTB2Q9BYZ6 727 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ILKAPQ9H0C8 392 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 GZMAP12544 262 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 IDO1P14902 403 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ATXN3P54252 364 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ENPEPQ07075 957 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ZNF844Q08AG5 666 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 PPIL2Q13356 520 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 RASA2Q15283 850 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 NT5DC1Q5TFE4 455 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 DHDDSQ86SQ9 333 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 STX12Q86Y82 276 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 CYGBQ8WWM9 190 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 ARHGEF26Q96DR7 871 aa7.44□□□□□ -1.22
CNOT1-216ENST00000569240 MLPHQ9BV36 600 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-216ENST00000569240 AMNQ9BXJ7 453 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms