RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 MRPS17Q9Y2R5 130 aaKnown RBP6.62□□□□□ -1.35
CDH13-212ENST00000569144 TMEM8BA6NDV4 472 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 MEIS3P2A8K0S8 358 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 MEIS1O00470 390 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 EIF1AYO14602 144 aaKnown RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 NRP1O14786 923 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 TGM5O43548 720 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 GAS2O43903 313 aaKnown RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 DDHD2O94830 711 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 EFEMP2O95967 443 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 ITGB2P05107 769 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 SPATA31D3P0C874 917 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 SFPQP23246 707 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDH13-212ENST00000569144 CDC27P30260 824 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 CDC25BP30305 580 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 CNR2P34972 360 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 CCR3P51677 355 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 DSG1Q02413 1049 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 TRDNQ13061 729 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 SIM2Q14190 667 aaPredicted RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 SART3Q15020 963 aaKnown RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 LONRF3Q496Y0 759 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 AASDHQ4L235 1098 aaPredicted RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 PEAR1Q5VY43 1037 aaPredicted RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 LILRA6Q6PI73 481 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 LRSAM1Q6UWE0 723 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 CWC27Q6UX04 472 aaKnown RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 SPATA31D4Q6ZUB0 917 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 NIPA1Q7RTP0 329 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 TAS1R1Q7RTX1 841 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 TEX2Q8IWB9 1127 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 GALNT12Q8IXK2 581 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 GPR65Q8IYL9 337 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 DTWD1Q8N5C7 304 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 CTCFLQ8NI51 663 aaPredicted RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 RILPL2Q969X0 211 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 PGBD4Q96DM1 585 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 ZNF668Q96K58 619 aaPredicted RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 FAM167AQ96KS9 214 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 FAM193BQ96PV7 902 aaPredicted RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 LZTS2Q9BRK4 669 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 PHF20Q9BVI0 1012 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 GCOM2Q9BZD3 368 aaPredicted RBP6.61□□□□□ -1.35
CDH13-212ENST00000569144 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDH13-212ENST00000569144 MARCH5Q9NX47 278 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 PPME1Q9Y570 386 aa6.61□□□□□ -1.35
CDH13-212ENST00000569144 FRYQ5TBA9 3013 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 CNTNAP2Q9UHC6 1331 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 SHISA7A6NL88 538 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 LINC01387J3KSC0 135 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 DHX15O43143 795 aaKnown RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 DEAF1O75398 565 aaPredicted RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 CSDE1O75534 798 aaKnown RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 DDAH1O94760 285 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 KCNK5O95279 499 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 FOSP01100 380 aaPredicted RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 HNRNPA1P09651 372 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDH13-212ENST00000569144 CHRNA4P43681 627 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 GNAQP50148 359 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 CDC42EP1Q00587 391 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 ANKRD45Q5TZF3 282 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 ZNF746Q6NUN9 644 aaPredicted RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 TXNDC11Q6PKC3 985 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 AGMOQ6ZNB7 445 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 SND1Q7KZF4 910 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDH13-212ENST00000569144 TRMT1LQ7Z2T5 733 aaKnown RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 GRASPQ7Z6J2 395 aaPredicted RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 CD163Q86VB7 1156 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 PALB2Q86YC2 1186 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 HOMEZQ8IX15 550 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 SMAP1Q8IYB5 467 aaPredicted RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 TMEM102Q8N9M5 508 aaPredicted RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 DNASE1L2Q92874 299 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 FGF13Q92913 245 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 MBOAT7Q96N66 472 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 KXD1Q9BQD3 176 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 INO80BQ9C086 356 aaPredicted RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 MUC3BQ9H195 1237 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 RSAD1Q9HA92 442 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 CHST7Q9NS84 486 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 DIAPH3Q9NSV4 1193 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 FNIP2Q9P278 1114 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 PIN4Q9Y237 131 aaKnown RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 PRG3Q9Y2Y8 225 aaPredicted RBP6.6□□□□□ -1.35
CDH13-212ENST00000569144 DOCK8Q8NF50 2099 aa6.6□□□□□ -1.35
CDH13-212ENST00000569144 ZZEF1O43149 2961 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 A0A1W2PP55 124 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 SRRM3A6NNA2 597 aaPredicted RBP6.59□□□□□ -1.35
CDH13-212ENST00000569144 HIP1O00291 1037 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 MAN2B1O00754 1011 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 ECI2O75521 394 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 PLEKHA8P1O95397 391 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 EPHA1P21709 976 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 HOXA9P31269 272 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 SREBF1P36956 1147 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 NTHL1P78549 312 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 CREMQ03060 361 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 RING1Q06587 406 aa6.59□□□□□ -1.35
CDH13-212ENST00000569144 STPG1Q5TH74 334 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms