RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 DNAJB1P25685 340 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 SERPINB4P48594 390 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 ERVFC1P60507 584 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 GTF2BQ00403 316 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 POU5F1Q01860 360 aaKnown RBP10.04□□□□□ -0.8
CAPN3-219ENST00000569136 TYRO3Q06418 890 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 DSC1Q08554 894 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 GRIK3Q13003 919 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 ADAM15Q13444 863 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 ALCAMQ13740 583 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 PKP1Q13835 747 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 SMC1AQ14683 1233 aaKnown RBP10.04□□□□□ -0.8
CAPN3-219ENST00000569136 POSTNQ15063 836 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 FOXD4L6Q3SYB3 417 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-219ENST00000569136 LCE2CQ5TA81 110 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 ADALQ6DHV7 355 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 SLFN12LQ6IEE8 588 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 MPZL3Q6UWV2 235 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 FOXD4L3Q6VB84 417 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-219ENST00000569136 ZNF720Q7Z2F6 126 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 CDR2LQ86X02 465 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-219ENST00000569136 COLGALT2Q8IYK4 626 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 GPR65Q8IYL9 337 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 EFHBQ8N7U6 833 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 GSTCDQ8NEC7 633 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 RPS6KC1Q96S38 1066 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 APOL6Q9BWW8 343 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 GBP3Q9H0R5 595 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 NXF3Q9H4D5 531 aaKnown RBP10.04□□□□□ -0.8
CAPN3-219ENST00000569136 ZHX3Q9H4I2 956 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 UBE2ZQ9H832 354 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-219ENST00000569136 PLEKHA5Q9HAU0 1116 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 MIOSQ9NXC5 875 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 SNTG2Q9NY99 539 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 MARK1Q9P0L2 795 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 USP25Q9UHP3 1055 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 IRAK3Q9Y616 596 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 DNMT3AQ9Y6K1 912 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-219ENST00000569136 MYMKA6NI61 221 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 NRP1O14786 923 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 DDHD2O94830 711 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 PIGRP01833 764 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 CLTAP09496 248 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 SRGAP2BP0DMP2 458 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 BMP4P12644 408 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 MLH1P40692 756 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 SLC11A1P49279 550 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 LIG4P49917 911 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 MCL1Q07820 350 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 GAS6Q14393 721 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 LEXMQ3ZCV2 418 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 XKR4Q5GH76 650 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 HERC4Q5GLZ8 1057 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-219ENST00000569136 EEF1DP3Q658K8 133 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 CNNM4Q6P4Q7 775 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 ALKAL1Q6UXT8 129 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 STXBP4Q6ZWJ1 553 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 CCDC65Q8IXS2 484 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 VPS52Q8N1B4 723 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 PDILTQ8N807 584 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 HVCN1Q96D96 273 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 BICD1Q96G01 975 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 SPATA32Q96LK8 384 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 TCF25Q9BQ70 676 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 IGFLR1Q9H665 355 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 ENTPD7Q9NQZ7 604 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 SLC38A7Q9NVC3 462 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 KBTBD4Q9NVX7 518 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 KCNH3Q9ULD8 1083 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 EXOC7Q9UPT5 735 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 ZDHHC9Q9Y397 364 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 TRANK1O15050 2925 aa10.03□□□□□ -0.8
CAPN3-219ENST00000569136 PRUNE2Q8WUY3 3088 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 C2orf71A6NGG8 1288 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 NT5C1B-RDH14C9J2C7 533 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 TNFRSF10BO14763 440 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 POLR2DO15514 142 aaKnown RBP10.02□□□□□ -0.81
CAPN3-219ENST00000569136 TADA2AO75478 443 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 RECQL4O94761 1208 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 C1RP00736 705 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 CTSAP10619 480 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 KCNE1P15382 129 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 EPB42P16452 691 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 IRS1P35568 1242 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 OR1G1P47890 313 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 SCNN1GP51170 649 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 AFF1P51825 1210 aaKnown RBP10.02□□□□□ -0.81
CAPN3-219ENST00000569136 HYAL1Q12794 435 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 SFSWAPQ12872 951 aaKnown RBP10.02□□□□□ -0.81
CAPN3-219ENST00000569136 ELAVL2Q12926 359 aaKnown RBP10.02□□□□□ -0.81
CAPN3-219ENST00000569136 TUSC3Q13454 348 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 ZNF568Q3ZCX4 644 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 RESP18Q5W5W9 173 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 DCLRE1AQ6PJP8 1040 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 SHC4Q6S5L8 630 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 TMEM184AQ6ZMB5 413 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 DYMQ7RTS9 669 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 PPFIBP1Q86W92 1011 aa10.02□□□□□ -0.81
CAPN3-219ENST00000569136 CD302Q8IX05 232 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms