RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 TRIM59Q8IWR1 403 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 RNF168Q8IYW5 571 aaPredicted RBP10.9□□□□□ -0.66
PKM-221ENST00000568743 TAS1R2Q8TE23 839 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 RIN2Q8WYP3 895 aaPredicted RBP10.9□□□□□ -0.66
PKM-221ENST00000568743 MRPL38Q96DV4 380 aaKnown RBP10.9□□□□□ -0.66
PKM-221ENST00000568743 HPDLQ96IR7 371 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 ZNF560Q96MR9 790 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 GAS2L1Q99501 681 aaPredicted RBP10.9□□□□□ -0.66
PKM-221ENST00000568743 TTPALQ9BTX7 342 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 NAT10Q9H0A0 1025 aaKnown RBP10.9□□□□□ -0.66
PKM-221ENST00000568743 FANCLQ9NW38 375 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 R3HCC1Q9Y3T6 440 aaKnown RBP10.9□□□□□ -0.66
PKM-221ENST00000568743 MTCH2Q9Y6C9 303 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.89□□□□□ -0.67
PKM-221ENST00000568743 KPNA7A9QM74 516 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 KCNJ18B7U540 433 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 CYB561D2O14569 222 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 TRAPPC3O43617 180 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 CXCL14O95715 111 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 URODP06132 367 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 CTSAP10619 480 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 FOSL2P15408 326 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 RPL17P18621 184 aaKnown RBP10.89□□□□□ -0.67
PKM-221ENST00000568743 MTIF2P46199 727 aaKnown RBP10.89□□□□□ -0.67
PKM-221ENST00000568743 ZNF165P49910 485 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 MXI1P50539 228 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 AP3M2P53677 418 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 ENPEPQ07075 957 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 ELAVL2Q12926 359 aaKnown RBP10.89□□□□□ -0.67
PKM-221ENST00000568743 MYO1EQ12965 1108 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 KCNJ12Q14500 433 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 SMC1AQ14683 1233 aaKnown RBP10.89□□□□□ -0.67
PKM-221ENST00000568743 NCAPHQ15003 741 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 PTPN14Q15678 1187 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 USP41Q3LFD5 358 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 SV2CQ496J9 727 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 SPOPLQ6IQ16 392 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 KIAA1841Q6NSI8 718 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.89□□□□□ -0.67
PKM-221ENST00000568743 C15orf39Q6ZRI6 1047 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 DHX40Q8IX18 779 aaKnown RBP10.89□□□□□ -0.67
PKM-221ENST00000568743 LRRC52Q8N7C0 313 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 SEMA4DQ92854 862 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 SUSD3Q96L08 255 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 SENP8Q96LD8 212 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 PI4K2AQ9BTU6 479 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 LMAN2LQ9H0V9 348 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 CBX8Q9HC52 389 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 TMEM8AQ9HCN3 771 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 CHST7Q9NS84 486 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 MAGEC2Q9UBF1 373 aaPredicted RBP10.89□□□□□ -0.67
PKM-221ENST00000568743 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.89□□□□□ -0.673e-8■□□□□ 9.6
PKM-221ENST00000568743 SNX9Q9Y5X1 595 aa10.89□□□□□ -0.67
PKM-221ENST00000568743 M0QZQ0 153 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 PER2O15055 1255 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 STX10O60499 249 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 ODC1P11926 461 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 FGFR3P22607 806 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 GTF2H1P32780 548 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 GTF2F1P35269 517 aaKnown RBP eCLIP10.88□□□□□ -0.67
PKM-221ENST00000568743 PNPLA4P41247 253 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 FMO5P49326 533 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 MARSP56192 900 aaKnown RBP10.88□□□□□ -0.67
PKM-221ENST00000568743 MCCD1P59942 119 aaPredicted RBP10.88□□□□□ -0.67
PKM-221ENST00000568743 MYL7Q01449 175 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 DSG1Q02413 1049 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 KCNH2Q12809 1159 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 CCDC85BQ15834 202 aaPredicted RBP10.88□□□□□ -0.67
PKM-221ENST00000568743 ZNF699Q32M78 642 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 TCEAL5Q5H9L2 206 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 CDKAL1Q5VV42 579 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 KIAA0319Q5VV43 1072 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 KRT39Q6A163 491 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 SCARA5Q6ZMJ2 495 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 RBM23Q86U06 439 aaKnown RBP10.88□□□□□ -0.67
PKM-221ENST00000568743 LUZP1Q86V48 1076 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 GLYCTKQ8IVS8 523 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 FAM114A1Q8IWE2 563 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 BPIFA3Q9BQP9 254 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 XYLT2Q9H1B5 865 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 TSPY26PQ9H489 355 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 NGRNQ9NPE2 291 aaKnown RBP10.88□□□□□ -0.67
PKM-221ENST00000568743 MRPL17Q9NRX2 175 aaKnown RBP10.88□□□□□ -0.67
PKM-221ENST00000568743 TAB2Q9NYJ8 693 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 NXF1Q9UBU9 619 aaKnown RBP10.88□□□□□ -0.67
PKM-221ENST00000568743 PCDHB8Q9UN66 801 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 POLIQ9UNA4 740 aa10.88□□□□□ -0.67
PKM-221ENST00000568743 C2orf71A6NGG8 1288 aa10.87□□□□□ -0.67
PKM-221ENST00000568743 BECN2A8MW95 431 aa10.87□□□□□ -0.67
PKM-221ENST00000568743 SYN3O14994 580 aa10.87□□□□□ -0.67
PKM-221ENST00000568743 ADAM12O43184 909 aa10.87□□□□□ -0.67
PKM-221ENST00000568743 LILRB3O75022 631 aa10.87□□□□□ -0.67
PKM-221ENST00000568743 AFPP02771 609 aaKnown RBP10.87□□□□□ -0.67
PKM-221ENST00000568743 CNPP09543 421 aaKnown RBP10.87□□□□□ -0.67
PKM-221ENST00000568743 ATP1A3P13637 1013 aa10.87□□□□□ -0.67
PKM-221ENST00000568743 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
PKM-221ENST00000568743 NRIP1P48552 1158 aa10.87□□□□□ -0.67
PKM-221ENST00000568743 BMS1Q14692 1282 aaKnown RBP10.87□□□□□ -0.67
PKM-221ENST00000568743 IQCB1Q15051 598 aa10.87□□□□□ -0.67
PKM-221ENST00000568743 PSMD5Q16401 504 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms