RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 STAU1O95793 577 aaKnown RBP9.1□□□□□ -0.95
SF3B3-212ENST00000568539 KRT19P08727 400 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 IGFBP6P24592 240 aaPredicted RBP9.1□□□□□ -0.95
SF3B3-212ENST00000568539 PIK3CAP42336 1068 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 SLC11A1P49279 550 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 RABGGTBP53611 331 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 MYL6P60660 151 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 UBXN1Q04323 297 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 KCNMA1Q12791 1236 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 CETN1Q12798 172 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 TRPC3Q13507 836 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 EXOC3L4Q17RC7 722 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 SGSM1Q2NKQ1 1148 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 TRIM65Q6PJ69 517 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 CD300LGQ6UXG3 332 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 GBP6Q6ZN66 633 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 TDHQ8IZJ6 230 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 EHBP1Q8NDI1 1231 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 C3orf58Q8NDZ4 430 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 RABGGTAQ92696 567 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 ERGIC2Q96RQ1 377 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 TMEM175Q9BSA9 504 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 CRACR2AQ9BSW2 395 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 INTS2Q9H0H0 1204 aaKnown RBP9.1□□□□□ -0.95
SF3B3-212ENST00000568539 VRTNQ9H8Y1 702 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 GCNT4Q9P109 453 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 RAPGEFL1Q9UHV5 662 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 SIK3Q9Y2K2 1263 aa9.1□□□□□ -0.95
SF3B3-212ENST00000568539 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-212ENST00000568539 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.09□□□□□ -0.95
SF3B3-212ENST00000568539 A0A1W2PQC6 194 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 F8W810 466 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 TMEM189-UBE2V1I3L0A0 370 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 NRP1O14786 923 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 SPTLC1O15269 473 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 CBFA2T2O43439 604 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 B3GAT3O94766 335 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 KIF4AO95239 1232 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 ASS1P00966 412 aaKnown RBP9.09□□□□□ -0.95
SF3B3-212ENST00000568539 ALDH2P05091 517 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 GALTP07902 379 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 MYOGP15173 224 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 LAG3P18627 525 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 SLC9A1P19634 815 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 PON1P27169 355 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 ATICP31939 592 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 PBX1P40424 430 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 PBX3P40426 434 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 PNPLA4P41247 253 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 OR1G1P47890 313 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 AARSP49588 968 aaKnown RBP eCLIP9.09□□□□□ -0.95
SF3B3-212ENST00000568539 BCAR1P56945 870 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 LILRA4P59901 499 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 SYCP1Q15431 976 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 PTPN21Q16825 1174 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 DPY19L2P1Q6NXN4 242 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 DCLRE1AQ6PJP8 1040 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 FIBCD1Q8N539 461 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 TAF4BQ92750 862 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 CLP1Q92989 425 aaKnown RBP9.09□□□□□ -0.95
SF3B3-212ENST00000568539 ELMO3Q96BJ8 720 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 HPDLQ96IR7 371 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 ZNF560Q96MR9 790 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 PI4K2AQ9BTU6 479 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 TRIM5Q9C035 493 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 APOBEC3GQ9HC16 384 aaKnown RBP9.09□□□□□ -0.95
SF3B3-212ENST00000568539 SIX2Q9NPC8 291 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 MARCH5Q9NX47 278 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 R3HCC1Q9Y3T6 440 aaKnown RBP9.09□□□□□ -0.95
SF3B3-212ENST00000568539 PCDHA11Q9Y5I1 949 aa9.09□□□□□ -0.95
SF3B3-212ENST00000568539 LINC01553A4QN01 128 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 KPNA7A9QM74 516 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 ARHGEF15O94989 841 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 EFEMP2O95967 443 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 ITGB1P05556 798 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 TPM3P06753 285 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 PAX3P23760 479 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 PBX2P40425 430 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 ALDH7A1P49419 539 aaKnown RBP9.08□□□□□ -0.96
SF3B3-212ENST00000568539 TAF6P49848 677 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 KLK7P49862 253 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 MRE11P49959 708 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 ZNF75DP51815 510 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 NOP14P78316 857 aaKnown RBP9.08□□□□□ -0.96
SF3B3-212ENST00000568539 APBA1Q02410 837 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 MYO1EQ12965 1108 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 ZNF699Q32M78 642 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 WDR72Q3MJ13 1102 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 SV2CQ496J9 727 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 WDR44Q5JSH3 913 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 SPOPLQ6IQ16 392 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 PHLDB3Q6NSJ2 640 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 KCNT2Q6UVM3 1135 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 TMEM173Q86WV6 379 aaPredicted RBP9.08□□□□□ -0.96
SF3B3-212ENST00000568539 SLC39A11Q8N1S5 342 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 COLGALT1Q8NBJ5 622 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 HASPINQ8TF76 798 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 BCL7CQ8WUZ0 217 aaPredicted RBP9.08□□□□□ -0.96
SF3B3-212ENST00000568539 MRFAP1L1Q96HT8 127 aa9.08□□□□□ -0.96
SF3B3-212ENST00000568539 ZNF558Q96NG5 402 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms