RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-219	ENST00000568382	UBE4B	O95155	1302 aa		13.32	□□□□□ -0.28
SCAPER-219	ENST00000568382	SCN1A	P35498	2009 aa		13.32	□□□□□ -0.28
SCAPER-219	ENST00000568382	CCDC195	A0A1B0GUA6	201 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	ANO9	A1A5B4	782 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382		M0QZQ0	153 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	SYN3	O14994	580 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	KIAA0391	O15091	583 aa	Known RBP	13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	CLIC2	O15247	247 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	TBC1D4	O60343	1298 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	SSTR3	P32745	418 aa	Predicted RBP	13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	VASP	P50552	380 aa	Predicted RBP	13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	LILRA4	P59901	499 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	PNOC	Q13519	176 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	RAB33A	Q14088	237 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	KNOP1	Q1ED39	458 aa	Known RBP	13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	ATAT1	Q5SQI0	421 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	CAVIN1	Q6NZI2	390 aa	Known RBP	13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	GPR149	Q86SP6	731 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	HDAC7	Q8WUI4	952 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	PHF7	Q9BWX1	381 aa	Predicted RBP	13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	SFXN1	Q9H9B4	322 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	DPP3	Q9NY33	737 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	PCDHB8	Q9UN66	801 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	PCDHA5	Q9Y5H7	936 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	CDY1	Q9Y6F8	540 aa		13.31	□□□□□ -0.28
SCAPER-219	ENST00000568382	C5orf42	Q9H799	3197 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	ZNF233	A6NK53	670 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	LOC730098	B7Z3J9	87 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	SPTLC1	O15269	473 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	RFPL2	O75678	378 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	RHOBTB3	O94955	611 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	MTHFR	P42898	656 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	AARS	P49588	968 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	SNRPF	P62306	86 aa	Known RBP	13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	SCARA3	Q6AZY7	606 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	DSTYK	Q6XUX3	929 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	NT5DC4	Q86YG4	428 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	CBWD2	Q8IUF1	395 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	RDH13	Q8NBN7	331 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	KREMEN2	Q8NCW0	462 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	GOLGA5	Q8TBA6	731 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	RPGRIP1	Q96KN7	1286 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	RIPOR3	Q96MK2	946 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	NAT10	Q9H0A0	1025 aa	Known RBP	13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	PLEKHA4	Q9H4M7	779 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	POMK	Q9H5K3	350 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	PDE11A	Q9HCR9	933 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	DPP7	Q9UHL4	492 aa		13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.3	□□□□□ -0.28
SCAPER-219	ENST00000568382	PAPLN	O95428	1278 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	CYP2J2	P51589	502 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	TFAM	Q00059	246 aa	Known RBP	13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	SLC8B1	Q6J4K2	584 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	ELMSAN1	Q6PJG2	1045 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	C15orf39	Q6ZRI6	1047 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	HS2ST1	Q7LGA3	356 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	C12orf56	Q8IXR9	622 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	MLKL	Q8NB16	471 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	APPL2	Q8NEU8	664 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	CMAS	Q8NFW8	434 aa	Predicted RBP	13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	SPATA20	Q8TB22	786 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	CACTIN	Q8WUQ7	758 aa	Known RBP	13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	BORCS6	Q96GS4	357 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	FAM84A	Q96KN4	292 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	SENP8	Q96LD8	212 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	NECTIN4	Q96NY8	510 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	POP1	Q99575	1024 aa	Known RBP	13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	KCTD10	Q9H3F6	313 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	KIAA1586	Q9HCI6	787 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	CGN	Q9P2M7	1197 aa	Known RBP	13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	FBXL5	Q9UKA1	691 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382	FBXW11	Q9UKB1	542 aa		13.29	□□□□□ -0.28
SCAPER-219	ENST00000568382		H7C4K7	107 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	ZMYND10	O75800	440 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	ABLIM3	O94929	683 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	OAZ2	O95190	189 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	CAVIN2	O95810	425 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	CCDC192	P0DO97	292 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	ROR1	Q01973	937 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	SNRNP35	Q16560	246 aa	Known RBP	13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	CTXN3	Q4LDR2	81 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	C1orf127	Q8N9H9	656 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	XXYLT1	Q8NBI6	393 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	ZNF461	Q8TAF7	563 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	CXorf38	Q8TB03	319 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	ZNF707	Q96C28	371 aa	Predicted RBP	13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	ANO10	Q9NW15	660 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	PTPRJ	Q12913	1337 aa		13.28	□□□□□ -0.28
SCAPER-219	ENST00000568382	DENND4A	Q7Z401	1863 aa		13.27	□□□□□ -0.28
SCAPER-219	ENST00000568382	DOCK6	Q96HP0	2047 aa		13.27	□□□□□ -0.28
SCAPER-219	ENST00000568382	WDR27	A2RRH5	827 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	PSMA7	O14818	248 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	FGFR1OP	O95684	399 aa	Known RBP	13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	ITGB3	P05106	788 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	TYMP	P19971	482 aa		13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	SP100	P23497	879 aa	Predicted RBP	13.27	□□□□□ -0.29
SCAPER-219	ENST00000568382	PAX3	P23760	479 aa		13.27	□□□□□ -0.29

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