RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 MAN2B1O00754 1011 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 OAZ2O95190 189 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 SCP2P22307 547 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 CCR2P41597 374 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 GRM2Q14416 872 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 DHX8Q14562 1220 aaKnown RBP20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 ZBTB6Q15916 424 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 GPBP1Q86WP2 473 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 SMARCD2Q92925 531 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 IRF7Q92985 503 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 ASB16Q96NS5 453 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 TSPAN18Q96SJ8 248 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 TBX20Q9UMR3 447 aa20.47■□□□□ 0.87
GTF3C1-207ENST00000567806 EP300Q09472 2414 aaPredicted RBP20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 HNRNPDLO14979 420 aaKnown RBP20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 FAM13AO94988 1023 aa20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 KRT18P05783 430 aaKnown RBP20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 FCARP24071 287 aa20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 TNFSF9P41273 254 aa20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 RPS9P46781 194 aaKnown RBP20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 FAM212AQ96EL1 285 aa20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 ZSWIM3Q96MP5 696 aa20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 REEP2Q9BRK0 252 aa20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 GPR88Q9GZN0 384 aa20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 SMC3Q9UQE7 1217 aa20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 CACNA1IQ9P0X4 2223 aa20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 CITO14578 2027 aa20.46■□□□□ 0.87
GTF3C1-207ENST00000567806 OR6C75A6NL08 312 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 OGTO15294 1046 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 PSMC3P17980 439 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 GDI1P31150 447 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 EPHB3P54753 998 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 PLD1Q13393 1074 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 TMEM130Q8N3G9 435 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 RASSF8Q8NHQ8 419 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 KCNN1Q92952 543 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 PGLYRP2Q96PD5 576 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 ZHX3Q9H4I2 956 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 SLITRK6Q9H5Y7 841 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 PARVGQ9HBI0 331 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 NDRG2Q9UN36 371 aaKnown RBP20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 PCDHGA2Q9Y5H1 932 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 ZNF292O60281 2723 aa20.45■□□□□ 0.86
GTF3C1-207ENST00000567806 K7ENM7 598 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 SPTLC1O15269 473 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 MOSPD3O75425 235 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 OR4Q2P0C623 313 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 GJA1P17302 382 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 ALDH1A3P47895 512 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 EPHA5P54756 1037 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 DUSP4Q13115 394 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 GPR17Q13304 367 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 ENOX2Q16206 610 aaKnown RBP20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 LARP1BQ659C4 914 aaKnown RBP20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 ARMCX5Q6P1M9 558 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 VITQ6UXI7 678 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 CD302Q8IX05 232 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 DCLK2Q8N568 766 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 SUMF1Q8NBK3 374 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 BEST2Q8NFU1 509 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 ZSCAN18Q8TBC5 510 aaPredicted RBP20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 DEPDC1BQ8WUY9 529 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 MSTO1Q9BUK6 570 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 ZNF334Q9HCZ1 680 aaPredicted RBP20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 TRPV5Q9NQA5 729 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 ZSCAN32Q9NX65 697 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 YIPF1Q9Y548 306 aa20.44■□□□□ 0.86
GTF3C1-207ENST00000567806 MIA3Q5JRA6 1907 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 ZNF263O14978 683 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 TRAK2O60296 914 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 BMP15O95972 392 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 PIGRP01833 764 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 TYMPP19971 482 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 PAX3P23760 479 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 ABCD1P33897 745 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 VIPR2P41587 438 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 AARSP49588 968 aaKnown RBP eCLIP20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 MCM2P49736 904 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 GUCY2FP51841 1108 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 FZD5Q13467 585 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 TEAD2Q15562 447 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 SPATA1Q5VX52 437 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 OVOS1Q6IE37 1185 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 MAP4K3Q8IVH8 894 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 MFSD6LQ8IWD5 586 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 YAF2Q8IY57 180 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 E2F7Q96AV8 911 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 TRPV4Q9HBA0 871 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 NCDNQ9UBB6 729 aa20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.43■□□□□ 0.86
GTF3C1-207ENST00000567806 COL4A3Q01955 1670 aa20.42■□□□□ 0.86
GTF3C1-207ENST00000567806 A0A0B4J269 797 aa20.42■□□□□ 0.86
GTF3C1-207ENST00000567806 NRG2O14511 850 aaPredicted RBP20.42■□□□□ 0.86
GTF3C1-207ENST00000567806 ADRB2P07550 413 aa20.42■□□□□ 0.86
GTF3C1-207ENST00000567806 LONP1P36776 959 aaKnown RBP20.42■□□□□ 0.86
GTF3C1-207ENST00000567806 LILRA4P59901 499 aa20.42■□□□□ 0.86
GTF3C1-207ENST00000567806 MYBPC2Q14324 1141 aa20.42■□□□□ 0.86
GTF3C1-207ENST00000567806 MCM6Q14566 821 aa20.42■□□□□ 0.86
GTF3C1-207ENST00000567806 SHKBP1Q8TBC3 707 aa20.42■□□□□ 0.86
GTF3C1-207ENST00000567806 FAM3CQ92520 227 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms