RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 PGBD1Q96JS3 809 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 HAPLN3Q96S86 360 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 USP35Q9P2H5 1018 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 TMA7Q9Y2S6 64 aaKnown RBP4.47□□□□□ -1.69
CDH1-211ENST00000567320 NEU2Q9Y3R4 380 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 ENTPD2Q9Y5L3 495 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 WNT6Q9Y6F9 365 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 WDR91A4D1P6 747 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 HSD3B2P26439 372 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 SLC6A4P31645 630 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 DYRK1AQ13627 763 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 PABPC1LQ4VXU2 614 aaKnown RBP4.46□□□□□ -1.7
CDH1-211ENST00000567320 RNF219Q5W0B1 726 aaPredicted RBP4.46□□□□□ -1.7
CDH1-211ENST00000567320 PGM2L1Q6PCE3 622 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 GADL1Q6ZQY3 521 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 PTF1AQ7RTS3 328 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 DCBLD1Q8N8Z6 715 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 SLC17A8Q8NDX2 589 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 MYCBPAPQ8TBZ2 947 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 SARAFQ96BY9 339 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 TIMP4Q99727 224 aa4.46□□□□□ -1.7
CDH1-211ENST00000567320 CCDC195A0A1B0GUA6 201 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 LINC00473A8K010 186 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 ADM5C9JUS6 153 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 EYA4O95677 639 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 CD1AP06126 327 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 SBK3P0C264 359 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 PPP3CBP16298 524 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 ANXA11P50995 505 aaKnown RBP4.45□□□□□ -1.7
CDH1-211ENST00000567320 SLC16A1P53985 500 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 PROK1P58294 105 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 PIGFQ07326 219 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 KLF1Q13351 362 aaPredicted RBP4.45□□□□□ -1.7
CDH1-211ENST00000567320 RASAL3Q86YV0 1011 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 ADGRG5Q8IZF4 528 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 HASPINQ8TF76 798 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 SCARB1Q8WTV0 552 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 HDAC10Q969S8 669 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 KLHL32Q96NJ5 620 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 MKS1Q9NXB0 559 aa4.45□□□□□ -1.7
CDH1-211ENST00000567320 PROM1O43490 865 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 ZNF280AP59817 542 aaPredicted RBP4.44□□□□□ -1.7
CDH1-211ENST00000567320 CDC42EP1Q00587 391 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 MC2RQ01718 297 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 TARDBPQ13148 414 aaKnown RBP eCLIP4.44□□□□□ -1.7
CDH1-211ENST00000567320 PTPRRQ15256 657 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 EZH2Q15910 746 aaKnown RBP4.44□□□□□ -1.7
CDH1-211ENST00000567320 TMEM119Q4V9L6 283 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 KIAA0895LQ68EN5 471 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 SDE2Q6IQ49 451 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 SLC30A10Q6XR72 485 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 MICALCLQ6ZW33 695 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 CFAP52Q8N1V2 620 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 FBXO41Q8TF61 875 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 ZNF778Q96MU6 729 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 SMOQ99835 787 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 JKAMPQ9P055 326 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 CTTNBP2NLQ9P2B4 639 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 PADI4Q9UM07 663 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 SLC45A2Q9UMX9 530 aa4.44□□□□□ -1.7
CDH1-211ENST00000567320 F5H697 171 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 NDUFS2O75306 463 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 SUN1O94901 812 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 TTLL1O95922 423 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 PRKCGP05129 697 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 WT1P19544 449 aaPredicted RBP4.43□□□□□ -1.7
CDH1-211ENST00000567320 NPTX2P47972 431 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 SOX10P56693 466 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 ERVK-21P61565 698 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 ITIH3Q06033 890 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 TXNRD1Q16881 649 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 KIAA1614Q5VZ46 1190 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 FCRLBQ6BAA4 426 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 TAPT1Q6NXT6 567 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 ZNF365Q70YC5 407 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 BHLHA9Q7RTU4 235 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 CAMKK1Q8N5S9 505 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 PDPRQ8NCN5 879 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 TMIEQ8NEW7 156 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 IL17RDQ8NFM7 739 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 IFI44Q8TCB0 444 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 CLPTM1LQ96KA5 538 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 TRIB1Q96RU8 372 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 TPSD1Q9BZJ3 242 aa4.43□□□□□ -1.7
CDH1-211ENST00000567320 ZNF277Q9NRM2 450 aaPredicted RBP4.43□□□□□ -1.7
CDH1-211ENST00000567320 VSX1Q9NZR4 365 aaPredicted RBP4.43□□□□□ -1.7
CDH1-211ENST00000567320 CGB1A6NKQ9 187 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 POLRMTO00411 1230 aaKnown RBP4.42□□□□□ -1.7
CDH1-211ENST00000567320 XPOTO43592 962 aaKnown RBP4.42□□□□□ -1.7
CDH1-211ENST00000567320 SLC43A1O75387 559 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 URI1O94763 535 aaPredicted RBP4.42□□□□□ -1.7
CDH1-211ENST00000567320 ELFN1P0C7U0 828 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 NR2F6P10588 404 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 NXPH1P58417 271 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 GRM1Q13255 1194 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 IL10RAQ13651 578 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 FLYWCH1Q4VC44 716 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 SUMO4Q6EEV6 95 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 CNTD1Q8N815 330 aa4.42□□□□□ -1.7
CDH1-211ENST00000567320 DPF1Q92782 380 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms