RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 POLR1AO95602 1720 aaPredicted RBP13.96□□□□□ -0.17
UBFD1-207ENST00000567212 USP46P62068 366 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 BLMHQ13867 455 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 PPP1R2P3Q6NXS1 205 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 TMEM35BQ8NCS4 154 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 CAPSLQ8WWF8 208 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 AP4S1Q9Y587 144 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 IVNS1ABPQ9Y6Y0 642 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 A0A087X0B3 334 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 DDHD2O94830 711 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 TFE3P19532 575 aaPredicted RBP13.96□□□□□ -0.17
UBFD1-207ENST00000567212 PSEN1P49768 467 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 KCNQ4P56696 695 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 AMPD2Q01433 879 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 CAPRIN1Q14444 709 aaKnown RBP13.96□□□□□ -0.17
UBFD1-207ENST00000567212 ZC2HC1CQ53FD0 456 aaPredicted RBP13.96□□□□□ -0.17
UBFD1-207ENST00000567212 RBM44Q6ZP01 1051 aaKnown RBP13.96□□□□□ -0.17
UBFD1-207ENST00000567212 MARK2Q7KZI7 788 aaKnown RBP13.96□□□□□ -0.17
UBFD1-207ENST00000567212 ATG9AQ7Z3C6 839 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 TMEM79Q9BSE2 394 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 MRPL40Q9NQ50 206 aaKnown RBP13.96□□□□□ -0.17
UBFD1-207ENST00000567212 ANGPTL3Q9Y5C1 460 aa13.96□□□□□ -0.17
UBFD1-207ENST00000567212 AGRPO00253 132 aa13.96□□□□□ -0.18
UBFD1-207ENST00000567212 MYBP10242 640 aa13.96□□□□□ -0.18
UBFD1-207ENST00000567212 S100A5P33763 92 aa13.96□□□□□ -0.18
UBFD1-207ENST00000567212 FMO5P49326 533 aa13.96□□□□□ -0.18
UBFD1-207ENST00000567212 GEMIN4P57678 1058 aaKnown RBP13.96□□□□□ -0.18
UBFD1-207ENST00000567212 NEDD8Q15843 81 aa13.96□□□□□ -0.18
UBFD1-207ENST00000567212 FAXCQ5TGI0 409 aa13.96□□□□□ -0.18
UBFD1-207ENST00000567212 HEXIM2Q96MH2 286 aaKnown RBP13.96□□□□□ -0.18
UBFD1-207ENST00000567212 SEMA6BQ9H3T3 888 aa13.96□□□□□ -0.18
UBFD1-207ENST00000567212 NMRK1Q9NWW6 199 aa13.96□□□□□ -0.18
UBFD1-207ENST00000567212 TAF4O00268 1085 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 PIK3R2O00459 728 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 WDR47O94967 919 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 MAP3K6O95382 1288 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 RAG1P15918 1043 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 RGS2P41220 211 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 TFDP2Q14188 446 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 CNGA2Q16280 664 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 MSL3Q8N5Y2 521 aaKnown RBP13.95□□□□□ -0.18
UBFD1-207ENST00000567212 EFCAB3Q8N7B9 438 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 ATXN2LQ8WWM7 1075 aaKnown RBP13.95□□□□□ -0.18
UBFD1-207ENST00000567212 KLHL8Q9P2G9 620 aaPredicted RBP13.95□□□□□ -0.18
UBFD1-207ENST00000567212 SEPT3Q9UH03 358 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 ZBTB1Q9Y2K1 713 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 SPDYE5A6NIY4 337 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 E9PBE3 544 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 ATP9BO43861 1147 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 KLHL41O60662 606 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 TSC22D2O75157 780 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 CDH6P55285 790 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 SMTNL2Q2TAL5 461 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 TMEM139Q8IV31 216 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 DDIASQ8IXT1 998 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 RFWD2Q8NHY2 731 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 LZICQ8WZA0 190 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 MED10Q9BTT4 135 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 EXOSC4Q9NPD3 245 aaKnown RBP13.95□□□□□ -0.18
UBFD1-207ENST00000567212 ADCY6O43306 1168 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 SNRPAP09012 282 aaKnown RBP13.95□□□□□ -0.18
UBFD1-207ENST00000567212 PMLP29590 882 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 GNA15P30679 374 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 CDK8P49336 464 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 SLC5A9Q2M3M2 681 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 ARHGEF16Q5VV41 709 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 ANGPTL8Q6UXH0 198 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 TMPRSS6Q8IU80 811 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 GIPC3Q8TF64 312 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 MAML3Q96JK9 1138 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 AGAP3Q96P47 875 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 ADPGKQ9BRR6 497 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 CAB39Q9Y376 341 aaPredicted RBP13.95□□□□□ -0.18
UBFD1-207ENST00000567212 CROCC2H7BZ55 1655 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 GDF11O95390 407 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 FLT3P36888 993 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 CCR3P51677 355 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 NUP107P57740 925 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 ROR1Q01973 937 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 PERM1Q5SV97 790 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 ZSWIM1Q9BR11 485 aa13.95□□□□□ -0.18
UBFD1-207ENST00000567212 ARIH1Q9Y4X5 557 aaPredicted RBP13.95□□□□□ -0.18
UBFD1-207ENST00000567212 RNF17Q9BXT8 1623 aaKnown RBP13.94□□□□□ -0.18
UBFD1-207ENST00000567212 MAP3K4Q9Y6R4 1608 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 FLT1P17948 1338 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 MAP3K15Q6ZN16 1313 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 INO80B-WBP1J3KQ70 363 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 FKBP6O75344 327 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 BMP3P12645 472 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 NELFEP18615 380 aaKnown RBP13.94□□□□□ -0.18
UBFD1-207ENST00000567212 MTMR2Q13614 643 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 NLRP10Q86W26 655 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 CSRNP1Q96S65 589 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 INO80BQ9C086 356 aaPredicted RBP13.94□□□□□ -0.18
UBFD1-207ENST00000567212 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 MADDQ8WXG6 1647 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 SALL3Q9BXA9 1300 aa13.94□□□□□ -0.18
UBFD1-207ENST00000567212 KIF1BO60333 1816 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms