RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TMEM189-UBE2V1I3L0A0 370 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 SOX1O00570 391 aaPredicted RBP12.37□□□□□ -0.43
KARS-207ENST00000566560 NRP1O14786 923 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 PPEF2O14830 753 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 PHACTR2O75167 634 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 B3GAT3O94766 335 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 GTF2H1P32780 548 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 RPL9P32969 192 aaKnown RBP12.37□□□□□ -0.43
KARS-207ENST00000566560 BMPR1AP36894 532 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 PIK3CAP42336 1068 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 ERVK-21P61565 698 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 TPM4P67936 248 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 MYL7Q01449 175 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 PPP3CAQ08209 521 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 IQCB1Q15051 598 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 ZACNQ401N2 412 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 EPC2Q52LR7 807 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 TCP11X2Q5H9J9 407 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 TRAPPC11Q7Z392 1133 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 LUZP1Q86V48 1076 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 C3orf58Q8NDZ4 430 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 ANKRD20A12PQ8NF67 263 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 BCL7CQ8WUZ0 217 aaPredicted RBP12.37□□□□□ -0.43
KARS-207ENST00000566560 ARNTL2Q8WYA1 636 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 ZNF516Q92618 1163 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 TMEM169Q96HH4 297 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 C11orf84Q9BUA3 381 aaPredicted RBP12.37□□□□□ -0.43
KARS-207ENST00000566560 COLEC11Q9BWP8 271 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 CERS4Q9HA82 394 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 TMEM8AQ9HCN3 771 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 SPG21Q9NZD8 308 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 R3HCC1Q9Y3T6 440 aaKnown RBP12.37□□□□□ -0.43
KARS-207ENST00000566560 NUB1Q9Y5A7 615 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 ATG2AQ2TAZ0 1938 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 SF3B1O75533 1304 aaKnown RBP eCLIP12.37□□□□□ -0.43
KARS-207ENST00000566560 ANO9A1A5B4 782 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 C5orf67F2Z3F1 127 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 GOLGA6L19H0YKK7 550 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 N4BP1O75113 896 aaKnown RBP12.36□□□□□ -0.43
KARS-207ENST00000566560 FGF18O76093 207 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 AFPP02771 609 aaKnown RBP12.36□□□□□ -0.43
KARS-207ENST00000566560 C4BPAP04003 597 aaKnown RBP12.36□□□□□ -0.43
KARS-207ENST00000566560 ALDH2P05091 517 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 ITGB1P05556 798 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 ZNF18P17022 549 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 PNPLA4P41247 253 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 TAF6P49848 677 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 RBP5P82980 135 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 TRPC3Q13507 836 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 MAN2A1Q16706 1144 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 CBWD6Q4V339 395 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 CBWD3Q5JTY5 395 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 CBWD5Q5RIA9 395 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 KRT39Q6A163 491 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 FUT10Q6P4F1 479 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 DCLRE1AQ6PJP8 1040 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 METTL3Q86U44 580 aaKnown RBP12.36□□□□□ -0.43
KARS-207ENST00000566560 KLHL23Q8NBE8 558 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 RNF214Q8ND24 703 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 TATDN2Q93075 761 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 IGSF21Q96ID5 467 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 LRCH3Q96II8 777 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 ANP32EQ9BTT0 268 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 HSD3B7Q9H2F3 369 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 TAB2Q9NYJ8 693 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 SIX4Q9UIU6 781 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 ADAM28Q9UKQ2 775 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 AGAP1Q9UPQ3 857 aa12.36□□□□□ -0.43
KARS-207ENST00000566560 PES1O00541 588 aaKnown RBP12.35□□□□□ -0.43
KARS-207ENST00000566560 PIRO00625 290 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 TADA2AO75478 443 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 RB1P06400 928 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 TPM2P07951 284 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 CDK11BP21127 795 aaKnown RBP12.35□□□□□ -0.43
KARS-207ENST00000566560 FMO5P49326 533 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 MCCD1P59942 119 aaPredicted RBP12.35□□□□□ -0.43
KARS-207ENST00000566560 KCNH2Q12809 1159 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 NCOA4Q13772 614 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 KRT31Q15323 416 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 ZNF699Q32M78 642 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 SV2CQ496J9 727 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 ZNF697Q5TEC3 545 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 C15orf39Q6ZRI6 1047 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 LRRC52Q8N7C0 313 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 CXorf38Q8TB03 319 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 TAS1R2Q8TE23 839 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 GDPD5Q8WTR4 605 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 TUBGCP2Q9BSJ2 902 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 IMPG2Q9BZV3 1241 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 ZNF576Q9H609 170 aa12.35□□□□□ -0.43
KARS-207ENST00000566560 CSPG5O95196 566 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 VNN1O95497 513 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 HLA-DRAP01903 254 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 ATP1A3P13637 1013 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 BRCC3P46736 316 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 MYL6P60660 151 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 PLCB3Q01970 1234 aa12.34□□□□□ -0.43
KARS-207ENST00000566560 KRT17Q04695 432 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms