RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ANKRD20A1Q5TYW2 823 aa22.89■■□□□ 1.25
SPSB3-208ENST00000566339 ANKRD20A3Q5VUR7 823 aa22.89■■□□□ 1.25
SPSB3-208ENST00000566339 C15orf39Q6ZRI6 1047 aa22.89■■□□□ 1.25
SPSB3-208ENST00000566339 MON1BQ7L1V2 547 aa22.89■■□□□ 1.25
SPSB3-208ENST00000566339 ENDOVQ8N8Q3 282 aaKnown RBP22.89■■□□□ 1.25
SPSB3-208ENST00000566339 TAS1R2Q8TE23 839 aa22.89■■□□□ 1.25
SPSB3-208ENST00000566339 RNPEPL1Q9HAU8 725 aa22.89■■□□□ 1.25
SPSB3-208ENST00000566339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.89■■□□□ 1.25
SPSB3-208ENST00000566339 C1orf112Q9NSG2 853 aa22.89■■□□□ 1.25
SPSB3-208ENST00000566339 SLC16A4O15374 487 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 EDF1O60869 148 aaKnown RBP22.88■■□□□ 1.25
SPSB3-208ENST00000566339 RALAP11233 206 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 CETPP11597 493 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 CLDN10P78369 228 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 DMP1Q13316 513 aaPredicted RBP22.88■■□□□ 1.25
SPSB3-208ENST00000566339 MORF4L2Q15014 288 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 DALRD3Q5D0E6 543 aaKnown RBP22.88■■□□□ 1.25
SPSB3-208ENST00000566339 LRRC38Q5VT99 294 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 SV2AQ7L0J3 742 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 VSIG1Q86XK7 387 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 PHF13Q86YI8 300 aaPredicted RBP22.88■■□□□ 1.25
SPSB3-208ENST00000566339 RCOR2Q8IZ40 523 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 ANKLE1Q8NAG6 615 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 ATG4AQ8WYN0 398 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 CSRNP1Q96S65 589 aa22.88■■□□□ 1.25
SPSB3-208ENST00000566339 RBM15Q96T37 977 aaKnown RBP eCLIP22.88■■□□□ 1.258e-6■□□□□ 11.1
SPSB3-208ENST00000566339 ZNFX1Q9P2E3 1918 aaKnown RBP22.87■■□□□ 1.25
SPSB3-208ENST00000566339 EXOC1LA0A1B0GW35 172 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 GSTTP1A0A1W2PQM5 241 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 ATP2A1O14983 1001 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 ICAM1P05362 532 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 GNAZP19086 355 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 CALB2P22676 271 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 TKFCQ3LXA3 575 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 ERICH1Q86X53 443 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 SPICE1Q8N0Z3 855 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 GPD1LQ8N335 351 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 KIF2BQ8N4N8 673 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 SMC6Q96SB8 1091 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 TLE6Q9H808 572 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 PHTF1Q9UMS5 762 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 STK38LQ9Y2H1 464 aa22.87■■□□□ 1.25
SPSB3-208ENST00000566339 ASTN2O75129 1339 aaPredicted RBP22.87■■□□□ 1.25
SPSB3-208ENST00000566339 DKC1O60832 514 aaKnown RBP eCLIP22.86■■□□□ 1.25
SPSB3-208ENST00000566339 SMNDC1O75940 238 aaKnown RBP eCLIP22.86■■□□□ 1.25
SPSB3-208ENST00000566339 KRT5P13647 590 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 UBXN2AP68543 259 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 C1QBPQ07021 282 aaKnown RBP22.86■■□□□ 1.25
SPSB3-208ENST00000566339 GRIPAP1Q4V328 841 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 EAPPQ56P03 285 aaPredicted RBP22.86■■□□□ 1.25
SPSB3-208ENST00000566339 SLC45A4Q5BKX6 768 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 PLEKHA7Q6IQ23 1121 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 MYLK2Q9H1R3 596 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 LNPEPQ9UIQ6 1025 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 R3HDM2Q9Y2K5 976 aaKnown RBP22.86■■□□□ 1.25
SPSB3-208ENST00000566339 KRT76Q01546 638 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 TMED2Q15363 201 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 BRDTQ58F21 947 aaPredicted RBP22.86■■□□□ 1.25
SPSB3-208ENST00000566339 HERPUD2Q9BSE4 406 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 FRMD8P1Q9BZ68 369 aaPredicted RBP22.86■■□□□ 1.25
SPSB3-208ENST00000566339 TRABDQ9H4I3 376 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 CYP39A1Q9NYL5 469 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 TMOD2Q9NZR1 351 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 GGT7Q9UJ14 662 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 ZBTB21Q9ULJ3 1066 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 SHOC2Q9UQ13 582 aa22.86■■□□□ 1.25
SPSB3-208ENST00000566339 GOLGA8IPA6NC78 632 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 GOLGA8JA6NMD2 632 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 SMAPO00193 183 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 PPP1R12AO14974 1030 aaPredicted RBP22.85■■□□□ 1.25
SPSB3-208ENST00000566339 ALOX15BO15296 676 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 ZWINTO95229 277 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 FDX1P10109 184 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 TSHRP16473 764 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 IBSPP21815 317 aaPredicted RBP22.85■■□□□ 1.25
SPSB3-208ENST00000566339 ECE1P42892 770 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 WDR44Q5JSH3 913 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 MAEAQ7L5Y9 396 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 PCGF5Q86SE9 256 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 LRRC8CQ8TDW0 803 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 STK32AQ8WU08 396 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 PRCCQ92733 491 aaPredicted RBP22.85■■□□□ 1.25
SPSB3-208ENST00000566339 CCDC127Q96BQ5 260 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 TDRD3Q9H7E2 651 aaKnown RBP22.85■■□□□ 1.25
SPSB3-208ENST00000566339 ACP6Q9NPH0 428 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 IP6K2Q9UHH9 426 aa22.85■■□□□ 1.25
SPSB3-208ENST00000566339 WDR64B1ANS9 1081 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 H0YIN7 160 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 C2CD2LO14523 706 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 TBC1D12O60347 775 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 TJP3O95049 919 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 ZSWIM2Q8NEG5 633 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 ZNF622Q969S3 477 aaKnown RBP eCLIP22.84■■□□□ 1.253e-9■□□□□ 9
SPSB3-208ENST00000566339 UTP4Q969X6 686 aaKnown RBP22.84■■□□□ 1.25
SPSB3-208ENST00000566339 ALKBH8Q96BT7 664 aaKnown RBP22.84■■□□□ 1.25
SPSB3-208ENST00000566339 SENP7Q9BQF6 1050 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 TCEAL9Q9UHQ7 104 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 CHKBQ9Y259 395 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 LIASO43766 372 aa22.84■■□□□ 1.25
SPSB3-208ENST00000566339 GCAP28676 217 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms