RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 CFAP47Q6ZTR5 3102 aa14.64□□□□□ -0.07
COMMD4-214ENST00000566230 GREB1Q4ZG55 1949 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-214ENST00000566230 HEPACAM2A8MVW5 462 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 K7ESF4 209 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 ZNF263O14978 683 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 VNN2O95498 520 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 MUTP22033 750 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 PROZP22891 400 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 HOXC13P31276 330 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 RPL9P32969 192 aaKnown RBP14.63□□□□□ -0.07
COMMD4-214ENST00000566230 CCT6AP40227 531 aaKnown RBP14.63□□□□□ -0.07
COMMD4-214ENST00000566230 NPTX2P47972 431 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 PTGDRQ13258 359 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 SIM2Q14190 667 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-214ENST00000566230 TEAD2Q15562 447 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 ZNF568Q3ZCX4 644 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 PPM1JQ5JR12 505 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 IQCEQ6IPM2 695 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 RNF19BQ6ZMZ0 732 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 DAW1Q8N136 415 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 ELMOD1Q8N336 334 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 TMEM130Q8N3G9 435 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 SPEM1Q8N4L4 309 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 SHKBP1Q8TBC3 707 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 ACAP3Q96P50 834 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 TARS2Q9BW92 718 aaKnown RBP14.63□□□□□ -0.07
COMMD4-214ENST00000566230 LRRC3Q9BY71 257 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 TMEM134Q9H6X4 195 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 SEMA4GQ9NTN9 838 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 RBM12Q9NTZ6 932 aaKnown RBP14.63□□□□□ -0.07
COMMD4-214ENST00000566230 C2orf42Q9NWW7 574 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 CNTN3Q9P232 1028 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 NOL7Q9UMY1 257 aaKnown RBP14.63□□□□□ -0.07
COMMD4-214ENST00000566230 NUB1Q9Y5A7 615 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 MYH11P35749 1972 aa14.63□□□□□ -0.07
COMMD4-214ENST00000566230 ATG2BQ96BY7 2078 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 CCDC169A6NNP5 214 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 GDF9O60383 454 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 MCF2P10911 925 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 SOX9P48436 509 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 MLLT6P55198 1093 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-214ENST00000566230 PEX3P56589 373 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 CSRP2Q16527 193 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 ST3GAL2Q16842 350 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 ZNF280DQ6N043 979 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 PRR23CQ6ZRP0 262 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 LEMD2Q8NC56 503 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 DDX12PQ92771 950 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 ZBTB45Q96K62 511 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-214ENST00000566230 MRPL4Q9BYD3 311 aaKnown RBP14.62□□□□□ -0.07
COMMD4-214ENST00000566230 ASAH2Q9NR71 780 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 MAFFQ9ULX9 164 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 KIAA1024Q9UPX6 916 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 PHLPP2Q6ZVD8 1323 aa14.62□□□□□ -0.07
COMMD4-214ENST00000566230 ANK1P16157 1881 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 NUP210Q8TEM1 1887 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-214ENST00000566230 PAPSS2O95340 614 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-214ENST00000566230 PDIA4P13667 645 aaKnown RBP14.61□□□□□ -0.07
COMMD4-214ENST00000566230 MAPK7Q13164 816 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 SLC10A6Q3KNW5 377 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 MCTP1Q6DN14 999 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 TXNDC11Q6PKC3 985 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 Q6ZS52 159 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 GPIHBP1Q8IV16 184 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 C4orf32Q8N8J7 132 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 APPL2Q8NEU8 664 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 BEST2Q8NFU1 509 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 LRRC3BQ96PB8 259 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 CRISPLD1Q9H336 500 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 DDX19AQ9NUU7 478 aaKnown RBP14.61□□□□□ -0.07
COMMD4-214ENST00000566230 ARHGAP28Q9P2N2 729 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 PCDHB8Q9UN66 801 aa14.61□□□□□ -0.07
COMMD4-214ENST00000566230 ZFHX4Q86UP3 3567 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 SLC38A8A6NNN8 435 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 CHADO15335 359 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 HIP1RO75146 1068 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 CPB1P15086 417 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 MCM4P33991 863 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 CNR2P34972 360 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
COMMD4-214ENST00000566230 FCHO2Q0JRZ9 810 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 SEZ6Q53EL9 994 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 RILPL1Q5EBL4 403 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 TTC38Q5R3I4 469 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 STXBP5Q5T5C0 1151 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 HAUS3Q68CZ6 603 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 HEATR6Q6AI08 1181 aaKnown RBP14.6□□□□□ -0.07
COMMD4-214ENST00000566230 MPZL3Q6UWV2 235 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 TMC8Q8IU68 726 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 HSCBQ8IWL3 235 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 CSGALNACT1Q8TDX6 532 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 E2F7Q96AV8 911 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 TCHPQ9BT92 498 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 GPR88Q9GZN0 384 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 DNAJC25Q9H1X3 360 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 TUBGCP4Q9UGJ1 667 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 YIPF1Q9Y548 306 aa14.6□□□□□ -0.07
COMMD4-214ENST00000566230 A0A1W2PRU2 124 aa14.59□□□□□ -0.07
COMMD4-214ENST00000566230 MYBPHLA2RUH7 354 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms